Lineage motifs multiple projects#139
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September 16, 2025 16:38
…a scaling factor * The scaling factor can be used to compensate for time scales in different projects
…s LineageMotifsUtils to class BranchSpotTree
…vor in LineageMotifsUtils)
…on the model graph
…ls for motif importing
…ess modifiers, enhance scale factor handling, and introduce helper methods for clarity. Add MotifContext for context encapsulation.
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September 16, 2025 16:59
* Add new method to compute color gradient between two colors * Add unit tests.
* Replace single color parameter with two colors (`color1`, `color2`) in commands and utilities. * Update `LineageMotifsUtils` to interpolate colors for motif tags between `color1` and `color2`. * Adjust related tests to handle gradient color generation. * Update descriptions and parameters to reflect color interpolation changes.
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September 17, 2025 11:30
…rom things needed only in unit tests * Refactor tests to use `Awaitility` for clearer and more flexible synchronization logic. * Remove `CountDownLatch` from commands and utilities. * Add `Awaitility` dependency to `pom.xml` (scope: test) * Update `LineageMotifsUtils` and tests to simplify synchronization handling.
…dOnImportCommand` for clarity
…dual spot export.
…dual spot export.
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