AI Analysis integration & JOSS Updates #62
Workflow file for this run
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| name: Test CCKP Toolkit Workflow | |
| on: | |
| push: | |
| branches: [ main ] | |
| pull_request: | |
| branches: [ main ] | |
| jobs: | |
| test: | |
| name: Run nf-test | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Install Nextflow | |
| run: | | |
| curl -s https://get.nextflow.io | bash | |
| mv nextflow /usr/local/bin/ | |
| nextflow -version | |
| - name: Install nf-test | |
| run: | | |
| curl -fsSL https://get.nf-test.com | bash | |
| mv nf-test /usr/local/bin/ | |
| nf-test version | |
| - name: Set up Docker | |
| uses: docker/setup-buildx-action@v2 | |
| - name: Run tests | |
| run: | | |
| nf-test test main.nf.test | |
| - name: Upload test results | |
| uses: actions/upload-artifact@v4 | |
| if: always() | |
| with: | |
| name: test-results | |
| path: | | |
| work/ | |
| .nextflow/ | |
| .nextflow.log | |
| retention-days: 7 |