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Added 3D ATAC-PALM assay to assay.csv #144

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Merged
merged 6 commits into from
Mar 4, 2025
Merged

Added 3D ATAC-PALM assay to assay.csv #144

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c426db0
Added 3D ATAC-PALM assay to assay.csv
aditya-nath-sage Sep 20, 2024
55620df
build jsonld
Sep 20, 2024
566524a
Update note for new term
Bankso Oct 31, 2024
a524c98
Merge branch 'main' into add-3D-ATAC-PALM-assay
Bankso Oct 31, 2024
0fd766f
Merge branch 'main' into add-3D-ATAC-PALM-assay
Bankso Mar 4, 2025
8b9b27b
Add 3D ATAC-PALM
Bankso Mar 4, 2025
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1 change: 1 addition & 0 deletions modules/shared/assay.csv
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Expand Up @@ -4,6 +4,7 @@ Attribute,Description,Valid Values,DependsOn,Required,Properties,Parent,DependsO
3' RNA-seq,"A molecular genetic technique that combines chromatin immunoprecipitation (ChIP) with massively parallel DNA sequencing to map the binding sites of DNA-associated proteins in a sample of cells. First, crosslinked protein-DNA complexes are isolated using ChIP. Next, the crosslinks are broken, the proteins are removed and the purified DNA is modified with adaptor oligonucleotides to facilitate massively parallel DNA sequencing. Following sequencing, the DNA sequences that are obtained can be mapped to their genomic locations.",,,FALSE,,Assay,,,,,,,,
3C,,,,FALSE,,Assay,,EFO,,"3c, Chromosome Conformation NG Capture-C Assay, Chromosome Conformation Capture Assay",EFO:0007689,https://www.ebi.ac.uk/ols/ontologies/efo/terms?iri=http%3A%2F%2Fwww.ebi.ac.uk%2Fefo%2FEFO_0007689,,
3C-qPCR,,,,FALSE,,Assay,,,,"Quantitative analysis of chromosome conformation capture assays, 3c-qpcr",,,,Not in any ontologies or NCIt
3D ATAC-PALM,,,,FALSE,,Assay,,,,,,,,AN 2024-09-20
3D Bioprinting,,,,FALSE,,Assay,,PubMed,,,PMID:26724184,https://pubmed.ncbi.nlm.nih.gov/26724184/,,Added by Brynn 09/23/2022
3D Cell Culture,,,,FALSE,,Assay,,,,"3d cell culture, 3D culture, 3D cell culture",,,,
4C,,,,FALSE,,Assay,,EFO,,"4C, 4c",EFO:0007690,http://www.ebi.ac.uk/efo/EFO_0007690,,
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