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Releases: mc2-center/pubmed-crawler

v6.2.2

30 Sep 18:44
15f1320

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What's Changed

  • Add UNION table handling by @Bankso in #31
  • [feat] Add CODEOWNERS file by @vpchung in #35
  • [fix] Get all grant numbers in a grant name by @vpchung in #38
  • [fix] Bug fixes related to DOI and related grants by @vpchung in #40

New Contributors

Full Changelog: v6.2.1...v6.2.2

v6.2.1

09 Jul 17:58
0bdbc09

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What's Changed

  • Bug fix: fix DOI capture (#30)

Full Changelog: v6.2.0...v6.2.1

v6.2.0

05 Jan 02:21
2376665

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What's Changed

  • Feature: deploy image on ghcr (instead of Synapse)

Full Changelog: v6.1.0...v6.2.0

v6.1.0

29 Sep 20:40
a7ce3db

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What's Changed

  • Upgrade synapseclient and pandas version in Dockerfile
  • General bug fixes

Full Changelog: v6.0.1...v6.1.0

v6.0.1

02 May 00:15
cb0739e

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What's Changed

  • Bug fix by @vpchung in #25 - crawler will now ignore Erratums (which do not have an authors list)

Full Changelog: v6.0.0...v6.0.1

v6.0.0

15 Mar 17:00
63e58fe

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What's Changed

  • update source of cv terms by @vpchung in #23 - crawler will no longer use the Synapse table to query for terms

Full Changelog: v5.0.0...v6.0.0

v5.0.0

13 Dec 09:06
dc1e569

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What's Changed

  • Use unpaywall API for OA status check by @vpchung in #17
  • Update colname and value for publication's OA by @vpchung in #18
  • Update manifest colnames to match data model by @brynnz22 in #19
  • Grant parsing updates by @vpchung in #20

Full Changelog: v4.0.0...v5.0.0

v4.0.0

11 Nov 10:09
7a0df01

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What's Changed

  • Use PMC APIs (in conjunction with Entrez) to pull publication info
  • Add a new column: publicationAccessibility
  • Capture information about publications' accessibility (Open-Access vs Restricted)

Full Changelog: v3.1.2...v4.0.0

v3.1.2

09 Nov 20:59
28c60d9

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What's Changed

Bug fixes, including:

  • return table as DataFrame rather than list when no new publications are found

Full Changelog: v3.1.1...v3.1.2

v3.1.1

08 Nov 17:52
9d5995e

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What's Changed

  • Bug fixes, including:
    • abstract_text defaults to "" when abstract is not found in the scrape
    • manifests are not generated when table of updates is empty

Full Changelog: v3.1.0...v3.1.1