Applications: DynaCLR refactor#370

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edyoshikun wants to merge 246 commits into

modular-viscy-stagingfrom

Commits on Feb 13, 2026

Commits on Feb 14, 2026

docs(phase-6): complete phase execution
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docs(07-code-migration): create phase plan
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feat(07-01): migrate select.py, distributed.py, segmentation.py to viscy-data

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feat(07-01): migrate hcs.py to viscy-data with utility import rewiring

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feat(07-01): migrate gpu_aug.py to viscy-data with dependency rewiring

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docs(07-01): complete core data module migration plan

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feat(07-03): migrate mmap_cache.py and ctmc_v1.py to viscy-data

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feat(07-03): migrate livecell.py with lazy optional dependency imports

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feat(07-03): migrate combined.py as-is with import rewiring

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feat(07-02): migrate cell_classification.py and cell_division_triplet.py
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docs(07-03): complete optional dependency module migration plan

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docs(07-02): complete specialized module migration plan

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feat(07-04): add complete public API exports to viscy_data __init__.py

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docs(07-04): complete public API exports plan - phase 7 fully done

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docs(phase-7): complete code migration execution
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docs(08-test-migration-and-validation): create phase plan
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test(08-01): add conftest.py with HCS OME-Zarr fixtures for viscy-data

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docs(08-02): complete smoke tests plan - phase 8 test migration done

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feat(08-01): migrate test_hcs, test_triplet, test_select to viscy-data package

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docs(08-01): complete data test migration plan summary

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docs(phase-8): complete test migration and validation
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docs(09-ci-integration): create phase plan
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feat(09-01): add viscy-data CI test jobs to GitHub Actions workflow

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docs(09-01): complete CI integration plan

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docs(phase-9): complete CI integration - milestone v1.1 done
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chore: complete v1.1 milestone — Extract viscy-data

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Commits on Feb 17, 2026

Commits on Feb 20, 2026

Commits on Feb 21, 2026

add the classifiers here
edyoshikun
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Commits on Feb 22, 2026

Commits on Feb 23, 2026

Commits on Feb 24, 2026

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Commits on Mar 7, 2026

Commits on Mar 8, 2026

recipes
edyoshikun
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Commits on Mar 12, 2026

Commits on Mar 13, 2026

fix the dataset statistics
edyoshikun
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Commits on Mar 16, 2026

Commits on Mar 17, 2026