Regenerate units excuses, add header, clean up units directory, and update CI #2601
Workflow file for this run
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| # Built from: | |
| # https://docs.github.com/en/actions/guides/building-and-testing-python | |
| name: Build and test nmdc-schema | |
| on: [ pull_request ] | |
| # Cancel outdated runs when new commits are pushed to the same PR | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| test: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: [ '3.10', '3.13' ] | |
| steps: | |
| #---------------------------------------------- | |
| # check-out repo and set-up python | |
| #---------------------------------------------- | |
| - name: Check out repository | |
| uses: actions/checkout@v4 | |
| - name: Install Poetry | |
| run: pipx install poetry | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v6 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: 'poetry' | |
| #---------------------------------------------- | |
| # install dependencies if cache does not exist | |
| #---------------------------------------------- | |
| - name: Install dependencies | |
| run: poetry install | |
| #---------------------------------------------- | |
| # build, test, and quality checks | |
| #---------------------------------------------- | |
| - name: Clean previous build artifacts | |
| run: make squeaky-clean | |
| - name: Build schema artifacts | |
| run: make all | |
| - name: Regenerate units reports | |
| run: make -C units fast | |
| - name: Run tests | |
| run: make test | |
| - name: Run LinkML linting | |
| run: make linkml-lint | |
| - name: Check dependencies (deptry) | |
| run: make check-dependencies |