The first column must be moved into the index#5
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medaks wants to merge 1 commit intomims-harvard:mainfrom
Open
The first column must be moved into the index#5medaks wants to merge 1 commit intomims-harvard:mainfrom
medaks wants to merge 1 commit intomims-harvard:mainfrom
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medaks
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Why:
In the section
Reading in ClinVec embeddings into Pythonyou dodf['node_index'] = df.indexbutdf.indexby default takes the values between 0 and length of the array.The first column of the CSV stores the actual node indices, so that must be moved into the df index instead.