Version 0.3.0

HIGHLIGHTS

New API
New User Guide
More examples

Changes

New API for variable importance methods with .fit(), .importance(), fdr_selection(), fwer_selection()

LOC0, CFI, CPI #372
Desparsified Lasso: #381
CluDL, EnCluDL #533 and #388
ModelXKnockoffs #367
d0CRT #220

Contributors

What's Changed

Fix build by @bthirion in #15
REL 0.2.0b by @bthirion in #16
Refactor CPI by @jpaillard in #14
Add CPI, LOCO and PermutationImportance to api.rst by @jpaillard in #22
25 add support for pd.DataFrame in CPI LOCO and PrmutationImportance by @jpaillard in #27
26 Variable importance: support 'decision_fn' 'transform' methods by @jpaillard in #29
30 accelerate cpi by using batch prediction and numpy array operations instead of for loop by @jpaillard in #31
Change README.md to a more precise installation guidance by @tbng in #23
[MAINT] use scm for version by @Remi-Gau in #55
Remove all the warning and error from sphinx by @lionelkusch in #82
Source and test layout by @lionelkusch in #98
Fix documentation by @lionelkusch in #99
ADA-SVR (1/4) Unused of parameter full_rank by @lionelkusch in #58
fix dependencies by @jpaillard in #110
Fix .gitignore by @lionelkusch in #108
Fix bug for the version of library in configuration file for the documentation by @lionelkusch in #74
120 use hinge loss for svm example by @jpaillard in #124
Improve the coverage of the tests and fix some minor bugs by @lionelkusch in #64
ADA-SVR (2/4) add comments and documentation of the functions and test by @lionelkusch in #73
Small update of the documentation by @lionelkusch in #147
Add tests, homogenise and document functions of utils for inference model by @lionelkusch in #132
Permutation_test (1/4): add comments and docstring of the functions by @lionelkusch in #111
Rename file file of ada_svr by @lionelkusch in #154
Estimation threshold(1/4): add comments and docstring of the functions by @lionelkusch in #122
switch to 3-clause BSD license by @jpaillard in #159
Remove the option y_fit of group_reid by @lionelkusch in #163
Add support for categorical & binary variables in CPI by @jpaillard in #152
Fix CI failure by formatting examples. by @jpaillard in #165
Fix a bug in coverage report by @lionelkusch in #168
Remove estimators by @lionelkusch in #166
85 update documentation theme by @jpaillard in #169
Fix broken links in API doc by @jpaillard in #184
Update the dependency by @lionelkusch in #176
Desparsified lasso(1/4): add comments and docstring of the functions by @lionelkusch in #127
Add a dependabot for pyhton and github-action by @lionelkusch in #197
Dependabot by @lionelkusch in #199
Register missing class attributes by @jpaillard in #200
Knockoffs(1/4): add comments and docstring of the functions by @lionelkusch in #128
dcrt0(1/4): add comments and docstring of the functions by @lionelkusch in #133
WIP add circleci by @jeromedockes in #208
continue circleci setup by @jeromedockes in #210
Rename score to importance in CPI, LOCO and PFI by @jpaillard in #221
Fix bug by storing group ids in list instead of array by @jpaillard in #228
Fix bibliography by @jpaillard in #224
Add example on the California housing dataset illustrating pitfalls of PFI by @jpaillard in #213
Ignore warning in the tests by @lionelkusch in #203
Improve the coverage of the tests for BasePerturbation and ConditionalSampling by @lionelkusch in #204
DOC fix docstring in deparsified_lasso_pvalue by @glemaitre in #206
Move annexe files in folder utils and statistical tools by @lionelkusch in #173
Fix warning when creating the bibliography by @lionelkusch in #235
Conditional vs marginal importance on the XOR dataset by @jpaillard in #218
Improve docstring of knockoff by @lionelkusch in #234
Improvement of the check_fit for base_perturbation by @lionelkusch in #202
Update the option for the documentation for failing with warning by @lionelkusch in #237
Example motivating model agnostic variable selection on circles dataset by @jpaillard in #223
Remove a warning of duplicate reid in api.rst by @lionelkusch in #238
Add classification example on the iris dataset by @jpaillard in #229
Bump codecov/codecov-action from 5.4.0 to 5.4.2 in the actions group by @dependabot[bot] in #245
Remane PermutationImportance to PermutationFeatureImportance by @lionelkusch in #243
Add tests for checking the error message of the chek_fit by @lionelkusch in #241
circleci by @jeromedockes in #214
Remove example based on complex simulated data by @jpaillard in #233
Knockoffs example - follow-up by @jpaillard in #236
Delete the documentation by @lionelkusch in #251
fix circleci by @lionelkusch in #255
Fix circleci by @lionelkusch in #256
EnCluDL(1/4): add comments and docstring of the functions by @lionelkusch in #156
Remove Perturbation Test, Adaptive Permutation Threshold Support Vector Regression and Empirical Thresholding by @lionelkusch in #242
Parallelize the example generation and increase the speed of knockoff example by @lionelkusch in #215
fix warning in the creation of the documentation by @lionelkusch in #239
Add badge for CircleCI by @lionelkusch in #262
Bump codecov/codecov-action from 5.4.2 to 5.4.3 in the actions group by @dependabot[bot] in #263
Improvement of circle ci by @lionelkusch in #261
Tools for develloper by @lionelkusch in #240
Update the workflow for the tests by @lionelkusch in #193
Fix token authorization for CIRCLE_CI by @lionelkusch in #269
Fix token by @lionelkusch in #270
Fix token by @lionelkusch in #271
Fix token by @lionelkusch in #272
Fix token by @lionelkusch in #273
Fix token by @lionelkusch in #274
Fix coverage by @lionelkusch in #276
Fix codeop and condition by @lionelkusch in https://github...