This repository contains the "ground truth" dataset of the Minimum Information about a Tailoring Enzyme (MITE) data repository (mite_data/data).
Furthermore, the repository contains auxiliary files and scripts to automatically update them:
- Metadata files summarizing information of all MITE entries in a single file (
mite_data/metadata) - Protein FASTA-files for all active (i.e. non-retired) MITE entries (
mite_data/fasta)
For more information on MITE, see the README of the MITE-Standard organisation page.
Nota bene: This installation will only work on (Ubuntu) Linux.
- Install
python 3.12.x - Install hatch (e.g. with
pipx install hatch) hatch env create- Update metadata files and download fasta files:
mite_data