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Add venom lymphatic diseases (#10411)
* Add venom lymphatic diseases addresses #5726 * update * update
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src/ontology/mondo-edit.obo

Lines changed: 304 additions & 0 deletions
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@@ -632686,10 +632686,15 @@ property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/
632686632686
id: MONDO:1011422
632687632687
name: severe combined immunodeficiency disease, non-human animal
632688632688
def: "Severe combined immunodeficiency disease that occurs in non-human animals." [MONDO:patterns/nonhuman_disease]
632689+
subset: venom_equine {source="VeNom:21229"}
632690+
subset: venom_farm_animal {source="VeNom:21229"}
632691+
subset: venom_large_animal {source="VeNom:21229"}
632689632692
xref: OMIA:000220 {source="MONDO:equivalentTo"}
632693+
xref: VeNom:21229 {source="MONDO:equivalentTo"}
632690632694
is_a: MONDO:0005583 {source="OMIA:000220"} ! non-human animal disease
632691632695
intersection_of: MONDO:0005583 ! non-human animal disease
632692632696
intersection_of: MONDO:0700097 MONDO:0015974 ! cross-species analog severe combined immunodeficiency
632697+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
632693632698
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/7225" xsd:anyURI
632694632699

632695632700
[Term]
@@ -654022,6 +654027,7 @@ name: mediastinal malignant lymphoma, non-human animal
654022654027
def: "Mediastinal malignant lymphoma that occurs in non-human animals." [MONDO:patterns/nonhuman_disease]
654023654028
subset: venom_equine {source="VeNom:81166"}
654024654029
xref: VeNom:81166 {source="MONDO:equivalentTo"}
654030+
is_a: MONDO:1015209 {source="https://orcid.org/0000-0002-5002-8648"} ! mediastinal lymphoma, non-human animal
654025654031
intersection_of: MONDO:0005583 ! non-human animal disease
654026654032
intersection_of: MONDO:0700097 MONDO:0004021 ! cross-species analog mediastinal malignant lymphoma
654027654033
relationship: excluded_from_qc_check http://purl.obolibrary.org/obo/mondo/sparql/qc/general/qc-single-child.sparql
@@ -671029,6 +671035,281 @@ subset: venom_small_animal {source="VeNom:100996"}
671029671035
xref: VeNom:100996 {source="MONDO:equivalentTo"}
671030671036
is_a: MONDO:1011345 {source="VeNom:100996"} ! poisoning, non-human animal
671031671037

671038+
[Term]
671039+
id: MONDO:1015193
671040+
name: lymphangiectasia, non-human animal
671041+
subset: venom_equine {source="VeNom:1200"}
671042+
subset: venom_exotics {source="VeNom:1200"}
671043+
subset: venom_farm_animal {source="VeNom:1200"}
671044+
subset: venom_large_animal {source="VeNom:1200"}
671045+
subset: venom_small_animal {source="VeNom:1200"}
671046+
xref: VeNom:1200 {source="MONDO:equivalentTo"}
671047+
is_a: MONDO:1011330 {source="VeNom:1200"} ! lymphoid system disorder, non-human animal
671048+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
671049+
671050+
[Term]
671051+
id: MONDO:1015194
671052+
name: lymph node lymphoma, non-human animal
671053+
subset: venom_exotics {source="VeNom:1210"}
671054+
subset: venom_small_animal {source="VeNom:1210"}
671055+
xref: VeNom:1210 {source="MONDO:equivalentTo"}
671056+
is_a: MONDO:0700102 {source="VeNom:1210"} ! lymphoma, non-human animal
671057+
is_a: MONDO:1013127 {source="VeNom:1210"} ! lymph node neoplasm, non-human animal
671058+
relationship: excluded_from_qc_check http://purl.obolibrary.org/obo/mondo/sparql/qc/general/qc-single-child.sparql
671059+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
671060+
671061+
[Term]
671062+
id: MONDO:1015195
671063+
name: splenic lymphoma, non-human animal
671064+
subset: venom_equine {source="VeNom:1214"}
671065+
subset: venom_exotics {source="VeNom:1214"}
671066+
subset: venom_farm_animal {source="VeNom:1214"}
671067+
subset: venom_large_animal {source="VeNom:1214"}
671068+
subset: venom_small_animal {source="VeNom:1214"}
671069+
xref: VeNom:1214 {source="MONDO:equivalentTo"}
671070+
is_a: MONDO:0700102 {source="VeNom:1214"} ! lymphoma, non-human animal
671071+
is_a: MONDO:1013152 {source="VeNom:1214"} ! spleen cancer, non-human animal
671072+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
671073+
671074+
[Term]
671075+
id: MONDO:1015196
671076+
name: lymph node mass, non-human animal
671077+
subset: venom_exotics {source="VeNom:1256"}
671078+
subset: venom_farm_animal {source="VeNom:1256"}
671079+
subset: venom_small_animal {source="VeNom:1256"}
671080+
xref: VeNom:1256 {source="MONDO:equivalentTo"}
671081+
is_a: MONDO:1011330 {source="VeNom:1256"} ! lymphoid system disorder, non-human animal
671082+
is_a: MONDO:1015234 {source="VeNom:1256"} ! mass lesion, non-human animal
671083+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
671084+
671085+
[Term]
671086+
id: MONDO:1015197
671087+
name: regional lymph node metastasis, non-human animal
671088+
subset: venom_equine {source="VeNom:1492"}
671089+
subset: venom_exotics {source="VeNom:1492"}
671090+
subset: venom_farm_animal {source="VeNom:1492"}
671091+
subset: venom_large_animal {source="VeNom:1492"}
671092+
subset: venom_small_animal {source="VeNom:1492"}
671093+
xref: VeNom:1492 {source="MONDO:equivalentTo"}
671094+
is_a: MONDO:0700098 {source="VeNom:1492"} ! neoplasm, non-human animal
671095+
is_a: MONDO:1011330 {source="VeNom:1492"} ! lymphoid system disorder, non-human animal
671096+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
671097+
671098+
[Term]
671099+
id: MONDO:1015198
671100+
name: multicentric lymphoma stage I, non-human animal
671101+
subset: venom_exotics {source="VeNom:16899"}
671102+
subset: venom_small_animal {source="VeNom:16899"}
671103+
xref: VeNom:16899 {source="MONDO:equivalentTo"}
671104+
is_a: MONDO:1015205 {source="VeNom:16899"} ! multicentric lymphoma, non-human animal
671105+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
671106+
671107+
[Term]
671108+
id: MONDO:1015199
671109+
name: multicentric lymphoma stage II, non-human animal
671110+
subset: venom_exotics {source="VeNom:16900"}
671111+
subset: venom_small_animal {source="VeNom:16900"}
671112+
xref: VeNom:16900 {source="MONDO:equivalentTo"}
671113+
is_a: MONDO:1015205 {source="VeNom:16900"} ! multicentric lymphoma, non-human animal
671114+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
671115+
671116+
[Term]
671117+
id: MONDO:1015200
671118+
name: multicentric lymphoma stage III, non-human animal
671119+
subset: venom_exotics {source="VeNom:16901"}
671120+
subset: venom_small_animal {source="VeNom:16901"}
671121+
xref: VeNom:16901 {source="MONDO:equivalentTo"}
671122+
is_a: MONDO:1015205 {source="VeNom:16901"} ! multicentric lymphoma, non-human animal
671123+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
671124+
671125+
[Term]
671126+
id: MONDO:1015201
671127+
name: multicentric lymphoma stage IV, non-human animal
671128+
subset: venom_exotics {source="VeNom:16902"}
671129+
subset: venom_small_animal {source="VeNom:16902"}
671130+
xref: VeNom:16902 {source="MONDO:equivalentTo"}
671131+
is_a: MONDO:1015205 {source="VeNom:16902"} ! multicentric lymphoma, non-human animal
671132+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
671133+
671134+
[Term]
671135+
id: MONDO:1015202
671136+
name: multicentric lymphoma stage V, non-human animal
671137+
subset: venom_exotics {source="VeNom:16903"}
671138+
subset: venom_small_animal {source="VeNom:16903"}
671139+
xref: VeNom:16903 {source="MONDO:equivalentTo"}
671140+
is_a: MONDO:1015205 {source="VeNom:16903"} ! multicentric lymphoma, non-human animal
671141+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
671142+
671143+
[Term]
671144+
id: MONDO:1015203
671145+
name: generalized lymphadenopathy, non-human animal
671146+
subset: venom_equine {source="VeNom:16918"}
671147+
subset: venom_exotics {source="VeNom:16918"}
671148+
subset: venom_farm_animal {source="VeNom:16918"}
671149+
subset: venom_large_animal {source="VeNom:16918"}
671150+
subset: venom_small_animal {source="VeNom:16918"}
671151+
xref: VeNom:16918 {source="MONDO:equivalentTo"}
671152+
is_a: MONDO:1011330 {source="VeNom:16918"} ! lymphoid system disorder, non-human animal
671153+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
671154+
671155+
[Term]
671156+
id: MONDO:1015204
671157+
name: localized lymphadenopathy, non-human animal
671158+
subset: venom_equine {source="VeNom:16919"}
671159+
subset: venom_exotics {source="VeNom:16919"}
671160+
subset: venom_farm_animal {source="VeNom:16919"}
671161+
subset: venom_large_animal {source="VeNom:16919"}
671162+
subset: venom_small_animal {source="VeNom:16919"}
671163+
xref: VeNom:16919 {source="MONDO:equivalentTo"}
671164+
is_a: MONDO:1011330 {source="VeNom:16919"} ! lymphoid system disorder, non-human animal
671165+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
671166+
671167+
[Term]
671168+
id: MONDO:1015205
671169+
name: multicentric lymphoma, non-human animal
671170+
subset: venom_exotics {source="VeNom:17190", source="VeNom:17185"}
671171+
subset: venom_small_animal {source="VeNom:17190", source="VeNom:17185"}
671172+
synonym: "lymphoma - multicentric" EXACT [VeNom:20664]
671173+
synonym: "lymphoma - multicentric (stage unspecified)" EXACT [VeNom:17185]
671174+
synonym: "lymphoma - multicentric - immunophenotype unknown" EXACT [VeNom:17190]
671175+
xref: VeNom:17185 {source="MONDO:equivalentTo"}
671176+
xref: VeNom:17190 {source="MONDO:equivalentTo"}
671177+
xref: VeNom:20664 {source="MONDO:equivalentTo"}
671178+
is_a: MONDO:0700102 {source="VeNom:17185", source="VeNom:17190"} ! lymphoma, non-human animal
671179+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
671180+
671181+
[Term]
671182+
id: MONDO:1015206
671183+
name: multicentric B-cell lymphoma, non-human animal
671184+
subset: venom_exotics {source="VeNom:17188"}
671185+
subset: venom_small_animal {source="VeNom:17188"}
671186+
xref: VeNom:17188 {source="MONDO:equivalentTo"}
671187+
is_a: MONDO:1015205 {source="VeNom:17188"} ! multicentric lymphoma, non-human animal
671188+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
671189+
671190+
[Term]
671191+
id: MONDO:1015207
671192+
name: multicentric T-cell lymphoma, non-human animal
671193+
subset: venom_exotics {source="VeNom:17189"}
671194+
subset: venom_small_animal {source="VeNom:17189"}
671195+
xref: VeNom:17189 {source="MONDO:equivalentTo"}
671196+
is_a: MONDO:1015205 {source="VeNom:17189"} ! multicentric lymphoma, non-human animal
671197+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
671198+
671199+
[Term]
671200+
id: MONDO:1015209
671201+
name: mediastinal lymphoma, non-human animal
671202+
subset: venom_equine {source="VeNom:17198"}
671203+
subset: venom_exotics {source="VeNom:17198"}
671204+
subset: venom_farm_animal {source="VeNom:17198"}
671205+
subset: venom_large_animal {source="VeNom:17198"}
671206+
subset: venom_small_animal {source="VeNom:17198"}
671207+
xref: VeNom:17198 {source="MONDO:equivalentTo"}
671208+
is_a: MONDO:0700102 {source="VeNom:17198"} ! lymphoma, non-human animal
671209+
is_a: MONDO:1013128 {source="https://orcid.org/0000-0002-5002-8648"} ! neoplasm of mediastinum, non-human animal
671210+
relationship: excluded_from_qc_check http://purl.obolibrary.org/obo/mondo/sparql/qc/general/qc-single-child.sparql
671211+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
671212+
671213+
[Term]
671214+
id: MONDO:1015210
671215+
name: laryngeal lymphoma, non-human animal
671216+
subset: venom_exotics {source="VeNom:17202"}
671217+
subset: venom_small_animal {source="VeNom:17202"}
671218+
xref: VeNom:17202 {source="MONDO:equivalentTo"}
671219+
is_a: MONDO:0700102 {source="VeNom:17202"} ! lymphoma, non-human animal
671220+
is_a: MONDO:0700104 {source="VeNom:17202"} ! respiratory system disorder, non-human animal
671221+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
671222+
671223+
[Term]
671224+
id: MONDO:1015211
671225+
name: foal immunodeficiency syndrome, non-human animal
671226+
subset: venom_equine {source="VeNom:20459"}
671227+
subset: venom_farm_animal {source="VeNom:20459"}
671228+
subset: venom_large_animal {source="VeNom:20459"}
671229+
xref: VeNom:20459 {source="MONDO:equivalentTo"}
671230+
is_a: MONDO:1011724 {source="VeNom:20459"} ! immunodeficiency disease, non-human animal
671231+
relationship: in_taxon NCBITaxon:9796 {source="VeNom:20459"} ! Equus caballus
671232+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
671233+
671234+
[Term]
671235+
id: MONDO:1015212
671236+
name: nasopharyngeal lymphoma, non-human animal
671237+
subset: venom_equine {source="VeNom:20665"}
671238+
subset: venom_farm_animal {source="VeNom:20665"}
671239+
subset: venom_large_animal {source="VeNom:20665"}
671240+
xref: VeNom:20665 {source="MONDO:equivalentTo"}
671241+
is_a: MONDO:0700102 {source="VeNom:20665"} ! lymphoma, non-human animal
671242+
is_a: MONDO:0700104 {source="VeNom:20665"} ! respiratory system disorder, non-human animal
671243+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
671244+
671245+
[Term]
671246+
id: MONDO:1015213
671247+
name: oral lymphoma, non-human animal
671248+
subset: venom_equine {source="VeNom:20666"}
671249+
subset: venom_farm_animal {source="VeNom:20666"}
671250+
subset: venom_large_animal {source="VeNom:20666"}
671251+
xref: VeNom:20666 {source="MONDO:equivalentTo"}
671252+
is_a: MONDO:0700102 {source="VeNom:20666"} ! lymphoma, non-human animal
671253+
is_a: MONDO:1011311 {source="VeNom:20666"} ! digestive system disorder, non-human animal
671254+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
671255+
671256+
[Term]
671257+
id: MONDO:1015215
671258+
name: generalized reactive lymph node hyperplasia, non-human animal
671259+
subset: venom_equine {source="VeNom:21805"}
671260+
subset: venom_exotics {source="VeNom:21805"}
671261+
subset: venom_farm_animal {source="VeNom:21805"}
671262+
subset: venom_large_animal {source="VeNom:21805"}
671263+
subset: venom_small_animal {source="VeNom:21805"}
671264+
xref: VeNom:21805 {source="MONDO:equivalentTo"}
671265+
is_a: MONDO:1011330 {source="VeNom:21805"} ! lymphoid system disorder, non-human animal
671266+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
671267+
671268+
[Term]
671269+
id: MONDO:1015216
671270+
name: localized reactive lymph node hyperplasia, non-human animal
671271+
subset: venom_equine {source="VeNom:21806"}
671272+
subset: venom_exotics {source="VeNom:21806"}
671273+
subset: venom_farm_animal {source="VeNom:21806"}
671274+
subset: venom_large_animal {source="VeNom:21806"}
671275+
subset: venom_small_animal {source="VeNom:21806"}
671276+
xref: VeNom:21806 {source="MONDO:equivalentTo"}
671277+
is_a: MONDO:1011330 {source="VeNom:21806"} ! lymphoid system disorder, non-human animal
671278+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
671279+
671280+
[Term]
671281+
id: MONDO:1015217
671282+
name: nasal lymphoma, non-human animal
671283+
subset: venom_equine {source="VeNom:21907"}
671284+
subset: venom_exotics {source="VeNom:21907"}
671285+
subset: venom_farm_animal {source="VeNom:21907"}
671286+
subset: venom_large_animal {source="VeNom:21907"}
671287+
subset: venom_small_animal {source="VeNom:21907"}
671288+
xref: VeNom:21907 {source="MONDO:equivalentTo"}
671289+
is_a: MONDO:0700102 {source="VeNom:21907"} ! lymphoma, non-human animal
671290+
is_a: MONDO:1013394 {source="VeNom:21907"} ! nasal disorder, non-human animal
671291+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
671292+
671293+
[Term]
671294+
id: MONDO:1015218
671295+
name: nasal and renal lymphoma, non-human animal
671296+
subset: venom_exotics {source="VeNom:21909"}
671297+
subset: venom_small_animal {source="VeNom:21909"}
671298+
xref: VeNom:21909 {source="MONDO:equivalentTo"}
671299+
is_a: MONDO:0700102 {source="VeNom:21909"} ! lymphoma, non-human animal
671300+
is_a: MONDO:1011365 {source="VeNom:21909"} ! urinary system disorder, non-human animal
671301+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
671302+
671303+
[Term]
671304+
id: MONDO:1015219
671305+
name: idiopathic lymphangitis, non-human animal
671306+
subset: venom_equine {source="VeNom:22308"}
671307+
subset: venom_farm_animal {source="VeNom:22308"}
671308+
subset: venom_large_animal {source="VeNom:22308"}
671309+
xref: VeNom:22308 {source="MONDO:equivalentTo"}
671310+
is_a: MONDO:1013656 {source="VeNom:22308"} ! lymphangitis, non-human animal
671311+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
671312+
671032671313
[Term]
671033671314
id: MONDO:1015220
671034671315
name: chemodectoma, non-human animal
@@ -684020,6 +684301,17 @@ is_a: MONDO:1013494 {source="VeNom:80290"} ! diphtheria, non-human animal
684020684301
relationship: excluded_from_qc_check http://purl.obolibrary.org/obo/mondo/sparql/qc/general/qc-single-child.sparql
684021684302
relationship: in_taxon NCBITaxon:9895 {source="https://orcid.org/0000-0002-5002-8648"} ! Bovidae
684022684303

684304+
[Term]
684305+
id: MONDO:1016589
684306+
name: caseous lymphadenitis, non-human animal
684307+
subset: venom_farm_animal {source="VeNom:80293"}
684308+
xref: VeNom:80293 {source="MONDO:equivalentTo"}
684309+
is_a: MONDO:1013590 {source="VeNom:80293"} ! lymphadenitis, non-human animal
684310+
is_a: MONDO:1014889 {source="VeNom:80293"} ! Corynebacterium pseudotuberculosis infection, non-human animal
684311+
relationship: disease_has_infectious_agent NCBITaxon:1719 {source="VeNom:80293"} ! Corynebacterium pseudotuberculosis
684312+
relationship: excluded_from_qc_check http://purl.obolibrary.org/obo/mondo/sparql/qc/general/qc-single-child.sparql
684313+
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
684314+
684023684315
[Term]
684024684316
id: MONDO:1016594
684025684317
name: corkscrew deviation of the penis, non-human animal
@@ -685081,6 +685373,18 @@ subset: venom_equine {source="VeNom:81498"}
685081685373
xref: VeNom:81498 {source="MONDO:equivalentTo"}
685082685374
is_a: MONDO:0700104 {source="VeNom:81498"} ! respiratory system disorder, non-human animal
685083685375

685376+
[Term]
685377+
id: MONDO:1016897
685378+
name: marble spleen disease, non-human animal
685379+
subset: venom_avian {source="VeNom:100761"}
685380+
subset: venom_exotics {source="VeNom:100761"}
685381+
xref: VeNom:100761 {source="MONDO:equivalentTo"}
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is_a: MONDO:0700049 {source="VeNom:100761"} ! infectious disease, non-human animal
685383+
is_a: MONDO:1011330 {source="VeNom:100761"} ! lymphoid system disorder, non-human animal
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relationship: disease_has_infectious_agent NCBITaxon:298333 {source="VeNom:100761"}
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relationship: in_taxon NCBITaxon:9103 {source="VeNom:100761"} ! Meleagris gallopavo
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property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/5726" xsd:anyURI
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685084685388
[Term]
685085685389
id: MONDO:1016901
685086685390
name: hypothermia, non-human animal

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