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Skip setting JUPYTER_RUNTIME_DIR #31

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6 changes: 0 additions & 6 deletions 1_preinstall_nanshe_workflow.sh
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Expand Up @@ -65,10 +65,4 @@ if [[ -f /misc/lsf/conf/profile.lsf ]]; then
export LSF_DRMAA_LIBRARY_PATH="/misc/sc/lsf-glibc2.3/lib/libdrmaa.so.0.1.1"
export DRMAA_LIBRARY_PATH="$LSF_DRMAA_LIBRARY_PATH"
fi

# Set the Jupyter runtime directory in the user's home.
# This simply follows the recommendation of our cluster admins
# to redirect this to a different location than XDG_RUNTIME_DIR.
# This is just what Jupyter picks when XDG_RUNTIME_DIR is disabled.
export JUPYTER_RUNTIME_DIR="$HOME/.local/share/jupyter/runtime"
EOF