ncsa · keshav-gandhi · Oct 16, 2025 · Oct 17, 2025 · Oct 17, 2025 · Oct 17, 2025
diff --git a/ChangeLog.md b/ChangeLog.md
@@ -1,6 +1,9 @@
 # NEAT has a new home
 NEAT is now a part of the NCSA github and active development will continue here. Please direct issues, comments, and requests to the NCSA issue tracker. Submit pull requests here insead of the old repo.
 
+# NEAT v4.3.5
+- An improvement rather than a bug fix this time. We moved vcf processing into the threaded portion, as our speeds were better than single threaded, but very slow on the vcf writing portion. This sped things up considerably, so we tested and confirmed that it is working as desired and are updating to a new version with improved VCF production in parallel mode.
+
 # NEAT 4.3.4
 - More fixes to bam creation, finalizing parallel code
 

diff --git a/README.md b/README.md
diff --git a/config_template/simple_template.yml b/config_template/simple_template.yml
@@ -28,6 +28,6 @@ overwrite_output: .
 
 mode: .
 size: .
-jobs: .
+threads: .
 cleanup_splits: .
 reuse_splits: .
diff --git a/data/H1N1.fa b/data/H1N1.fa
diff --git a/data/H1N1.fa.gz b/data/H1N1.fa.gz