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Fusions between unannotated transcribed DNA regions

Status: Open.

#227 In ndaniel/fusioncatcher;

· balayev1 opened on Dec 6, 2024

Multiple version of MySQL on ensembl FTP causes error in get_synonyms.py

Status: Open.

#226 In ndaniel/fusioncatcher;

· ktmf1991 opened on Dec 6, 2024

How to output FusionCatcher predicted gene fusions in BEDPE format?

Status: Open.

#225 In ndaniel/fusioncatcher;

· SysLuke opened on Nov 8, 2024

feature request: report transcripts

Status: Open.

#224 In ndaniel/fusioncatcher;

· anoronh4 opened on Oct 31, 2024

Issue Encountered While Running FusionCatcher

Status: Open.

#223 In ndaniel/fusioncatcher;

· WANGW-z opened on Aug 20, 2024

Predicted_fused_transcripts and Predicted_fused_proteins columns are missing

Status: Open.

#222 In ndaniel/fusioncatcher;

· makarov-ccf opened on Aug 6, 2024

Error downloading Canis lupus familiaris genome from Ensembl

Status: Open.

#221 In ndaniel/fusioncatcher;

· SeungWWoo opened on Aug 6, 2024

get_synonyms.py fails to infer the right URL

Status: Open.

#220 In ndaniel/fusioncatcher;

· priesgo opened on Jul 5, 2024

Change --link hard to --link soft to be run in Tower

Status: Open.

#219 In ndaniel/fusioncatcher;

· projassanchez opened on Mar 1, 2024

Any plan to make a release incorporating EnSEML v110 - GENCODE v44 ?

Status: Open.

#218 In ndaniel/fusioncatcher;

· af8 opened on Nov 16, 2023

Python 2.7 to 3.0?

Status: Open.

#217 In ndaniel/fusioncatcher;

· jdjdj0202 opened on Nov 3, 2023

Bowtie2 and STAR cat different psl ?

Status: Open.

#216 In ndaniel/fusioncatcher;

· nihilee opened on Oct 20, 2023