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Port regression test 156 to Pytests #3477
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# -*- coding: utf-8 -*- | ||
# | ||
# test_ticket_156.py | ||
# | ||
# This file is part of NEST. | ||
# | ||
# Copyright (C) 2004 The NEST Initiative | ||
# | ||
# NEST is free software: you can redistribute it and/or modify | ||
# it under the terms of the GNU General Public License as published by | ||
# the Free Software Foundation, either version 2 of the License, or | ||
# (at your option) any later version. | ||
# | ||
# NEST is distributed in the hope that it will be useful, | ||
# but WITHOUT ANY WARRANTY; without even the implied warranty of | ||
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the | ||
# GNU General Public License for more details. | ||
# | ||
# You should have received a copy of the GNU General Public License | ||
# along with NEST. If not, see <http://www.gnu.org/licenses/>. | ||
import nest | ||
import numpy as np | ||
import pytest | ||
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def test_ticket_156(): | ||
""" | ||
Verify that poisson_generator_ps generates identical spike trains for given | ||
start and stop times across different simulation resolutions and different targets. | ||
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Protocol: | ||
1. poisson_generator_ps projects to two spike_recorders. | ||
2. Run for different resolutions, record precise spike times in ms. | ||
3. Test all spikes are in (start, stop]. | ||
4. Test for different results between spike_recorders. | ||
5. Test for identical results across resolutions. | ||
""" | ||
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ps_params = {"origin": 0.0, "start": 1.0, "stop": 2.0, "rate": 12345.0} # Expect ~ 12.3 spikes | ||
resolutions = [0.01, 0.1, 0.2, 0.5, 1.0] | ||
simtime = ps_params["stop"] + 2.0 | ||
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def single_trial(h): | ||
""" | ||
Returns concatenated spike times recorded by the two spike recorders. | ||
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Asserts that single spike trains fulfill requirements. | ||
""" | ||
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nest.ResetKernel() | ||
nest.resolution = h | ||
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pg = nest.Create("poisson_generator_ps", params=ps_params) | ||
srs = nest.Create("spike_recorder", n=2) | ||
nest.Connect(pg, srs, syn_spec={"delay": 1.0, "weight": 1.0}) | ||
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nest.Simulate(simtime) | ||
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spike_times = srs.get("events", "times") | ||
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# Test that the two recorders recorded different times | ||
assert not np.array_equal(*spike_times) | ||
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# Test that all spike times are in (start, stop] | ||
all_spike_times = np.concatenate(spike_times) | ||
assert all(all_spike_times > ps_params["origin"] + ps_params["start"]) | ||
assert all(all_spike_times <= ps_params["origin"] + ps_params["stop"]) | ||
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return all_spike_times | ||
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# Run trials for each resolution and check all resolutions yield identical spike trains | ||
results = [single_trial(h) for h in resolutions] | ||
for train in results[1:]: | ||
assert np.allclose(train, results[0], atol=1e-15) |
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