Search results

HaplotypeCaller Process Only Processes One File

Status: Open.

#5728 In nextflow-io/nextflow;

· zbaida-achraf opened on Jan 30, 2025

NullPointerException when retrying task with an input transfer failure

Status: Open.

#5727 In nextflow-io/nextflow;

· jorgee opened on Jan 30, 2025

env with non-existent host environment variable leads to warnings

Status: Open.

#5722 In nextflow-io/nextflow;

· pinin4fjords opened on Jan 28, 2025

Unable to read from Oracle S3 buckets

Status: Open.

#5720 In nextflow-io/nextflow;

· mcolpus opened on Jan 28, 2025

file.getName() doesn't strip the parent directory as described in the documentation.

Status: Open.

#5718 In nextflow-io/nextflow;

· mahesh-panchal opened on Jan 28, 2025

Ignore "pool exists" error on Azure Batch

executor/azure-batch

Status: Open.

#5713 In nextflow-io/nextflow;

· adamrtalbot opened on Jan 25, 2025

WARN: Circular file path detected -- Files in the following directory will be ignored: /bin/X11

Status: Open.

#5710 In nextflow-io/nextflow;

· A-Noizes opened on Jan 24, 2025

Nextflow to gracefully handle Google gRPC API call failures

Status: Open.

#5703 In nextflow-io/nextflow;

· robnewman opened on Jan 23, 2025

How to set the computing resources (cpus, memory) in total submitted jobs

executor/slurm

good first issue

Status: Open.

#5702 In nextflow-io/nextflow;

· nttg8100 opened on Jan 23, 2025

Google batch arrays don't mount all required mounts

executor/google-batch

Status: Open.

#5701 In nextflow-io/nextflow;

· chris-mbiomics opened on Jan 23, 2025

Strange behaviour of cache and resume with docker failures

Status: Open.

#5688 In nextflow-io/nextflow;

· awgymer opened on Jan 21, 2025

Odd errors for named stdout output

lang/processes

Status: Open.

#5680 In nextflow-io/nextflow;

· njspix opened on Jan 17, 2025