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nextstrain / avian-flu Public

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Fork 10
Star 28

Code
Issues 18
Pull requests 7
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Replace fauna with curation pipeline#161

Merged

jameshadfield merged 6 commits into

masternextstrain/avian-flu:masterfrom

james/replace-fauna-with-curation-pipelinenextstrain/avian-flu:james/replace-fauna-with-curation-pipelineCopy head branch name to clipboard

Feb 1, 2026

Conversation Commits6 (6)Checks Files changed

Merged

Replace fauna with curation pipeline#161
jameshadfield merged 6 commits into
masterfrom
james/replace-fauna-with-curation-pipeline

Commits

Commits on Jan 27, 2026

Update hardcoded strain names part I
jameshadfield
committed
Update hardcoded strain names part II
jameshadfield
committed
[ingest] improve parallalisation of GenoFLU
jameshadfield
committed

Commits on Jan 29, 2026

[ingest] GenoFLU workflow for curated data
jameshadfield
committed
[phylo] allow metadata hotfixes
jameshadfield
committed
Remove fauna references / ingest
jameshadfield
committed

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