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Duplicated error with soft_filtered_transcripts is true

bugSomething isn't workingSomething isn't working

Status: Open.

#52 In nf-core/denovotranscript;

· KhoiDang410 opened on Dec 29, 2025

Separate assemblies for separate samples

enhancementNew feature or requestNew feature or request

Status: Open.

#48 In nf-core/denovotranscript;

· avani-bhojwani opened on Oct 7, 2025

SPAdes / Trinity running out of space still

bugSomething isn't workingSomething isn't working

Status: Open.

#41 In nf-core/denovotranscript;

· devjanee opened on Apr 8, 2025

JSON schema: Denovotranscript

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

#40 In nf-core/denovotranscript;

· jen-reeve opened on Mar 25, 2025

Consider splitting Trinity stages into separate tasks

enhancementNew feature or requestNew feature or request

Status: Open.

#39 In nf-core/denovotranscript;

· pansapiens opened on Feb 11, 2025

Using Trinity with grid_exec

bugSomething isn't workingSomething isn't working

Status: Open.

#38 In nf-core/denovotranscript;

· avani-bhojwani opened on Jan 31, 2025