Merge nf-core template 4.0.2 into dev#354
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Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
jonasscheid
commented
May 19, 2026
Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>
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Done thanks for the hint :) |
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Can we merge? CI won't pass due to Biomart servers being flaky (fix will come soon hopefully) |
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I guess it should be fine. |
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If you OK with it, I can bypass rules |
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That's fine for me |
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Merge
nf-core/toolstemplate 4.0.2 intodev. Note: Variant tests 5/7 not working currently due to biomart issues (non-blocking this PR imo)PR checklist
nf-core pipelines lint).nextflow run . -profile test,docker --outdir <OUTDIR>).nextflow run . -profile debug,test,docker --outdir <OUTDIR>).docs/usage.mdis updated.docs/output.mdis updated.CHANGELOG.mdis updated.README.mdis updated (including new tool citations and authors/contributors).