Update argNorm's citation to publication in Bioinformatics

[Vedanth-Ramji]

argNorm was recently published in Bioinformatics: https://doi.org/10.1093/bioinformatics/btaf173

The tool has also changed a bit since it was last added as an nf-core module, I'll be working on a few PRs to integrate the latest version with funcscan.

[github-actions]

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Hi @Vedanth-Ramji,

It looks like this pull-request is has been made against the Vedanth-Ramji/funcscan master branch.
The master branch on nf-core repositories should always contain code from the latest release.
Because of this, PRs to master are only allowed if they come from the Vedanth-Ramji/funcscan dev branch.

You do not need to close this PR, you can change the target branch to dev by clicking the "Edit" button at the top of this page.
Note that even after this, the test will continue to show as failing until you push a new commit.

Thanks again for your contribution!

[jasmezz]

Congratulations to the accepted paper! 🥳
Just adapt the citation format to the one we use in funcscan, see comment.

[jasmezz]

Suggested change

	> Svetlana Ugarcina Perovic, Vedanth Ramji, Hui Chong, Yiqian Duan, Finlay Maguire, Luis Pedro Coelho, argNorm: normalization of antibiotic resistance gene annotations to the Antibiotic Resistance Ontology (ARO), Bioinformatics, 2025;, btaf173, https://doi.org/10.1093/bioinformatics/btaf173
	> Ugarcina Perovic, S., Ramji, V., Chong, H., Duan, Y., Maguire, F., Coelho, L. P. (2025). argNorm: normalization of antibiotic resistance gene annotations to the Antibiotic Resistance Ontology (ARO), Bioinformatics, btaf173. [DOI: 10.1093/bioinformatics/btaf173](https://doi.org/10.1093/bioinformatics/btaf173)

[jfy133]

@Vedanth-Ramji do you want to also update the module itself (if my changes on nf-core/modules was OK )/the pipeline code in this PR to address the structural change you mentioned on slack in this PR?

[jfy133]

@Vedanth-Ramji do you sitll plan to look at that?

[jasmezz]

I cannot pull latest dev into this branch because it's from the fork's master branch. How do we deal with it, copy changes to a new branch/PR to get the CI checks working and close this PR? I wanted to merge this citation update and add the argnorm update as a to-do in a new issue.

[jfy133]

Yeah, I've converted it to draft to act as a reference - make a new branch but make sure to reference @Vedanth-Ramji in a commit, PR, changelog to ensure attribution!