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matthdsmmashehu
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pin build version for multiqc (#11759)
* pin build version for multiqc * fix singularity urls * update seqera container via `nf-core m container create multiqc` from nf-core/tools#3954 --------- Co-authored-by: mashehu <mashehu3@gmail.com>
1 parent e62a1ec commit 98403d1

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modules/nf-core/multiqc/.conda-lock/linux_amd64-bd-839587b417d23042_1.txt renamed to modules/nf-core/multiqc/.conda-lock/linux_amd64-bd-c17fb751507e9dfc_1.txt

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modules/nf-core/multiqc/.conda-lock/linux_arm64-bd-3e45d17b40a576b4_1.txt renamed to modules/nf-core/multiqc/.conda-lock/linux_arm64-bd-5c84a5000a226ab5_1.txt

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modules/nf-core/multiqc/main.nf

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@@ -4,8 +4,8 @@ process MULTIQC {
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conda "${moduleDir}/environment.yml"
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container "${workflow.containerEngine in ['singularity', 'apptainer'] && !task.ext.singularity_pull_docker_container
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? 'https://community-cr-prod.seqera.io/docker/registry/v2/blobs/sha256/12/1297c0f5075c19486da167ebf1b6136907d6b5339697b87b29fda335221785b3/data'
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: 'community.wave.seqera.io/library/multiqc:1.35--839587b417d23042'}"
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? 'https://community-cr-prod.seqera.io/docker/registry/v2/blobs/sha256/c8/c8e346f4f6080eadf1253505e6ff09ef004454fc18e8d672006fd7b222cc412e/data'
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: 'community.wave.seqera.io/library/multiqc:1.35--c17fb751507e9dfc'}"
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input:
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tuple val(meta), path(multiqc_files, stageAs: "?/*"), path(multiqc_config, stageAs: "?/*"), path(multiqc_logo), path(replace_names), path(sample_names)

modules/nf-core/multiqc/meta.yml

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@@ -110,24 +110,24 @@ maintainers:
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containers:
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conda:
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linux/amd64:
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lock_file: modules/nf-core/multiqc/.conda-lock/linux_amd64-bd-839587b417d23042_1.txt
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lock_file: modules/nf-core/multiqc/.conda-lock/linux_amd64-bd-c17fb751507e9dfc_1.txt
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linux/arm64:
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lock_file: modules/nf-core/multiqc/.conda-lock/linux_arm64-bd-3e45d17b40a576b4_1.txt
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lock_file: modules/nf-core/multiqc/.conda-lock/linux_arm64-bd-5c84a5000a226ab5_1.txt
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docker:
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linux/amd64:
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name: community.wave.seqera.io/library/multiqc:1.35--839587b417d23042
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build_id: bd-839587b417d23042_1
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scan_id: sc-f87d7a31551c029f_1
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name: community.wave.seqera.io/library/multiqc:1.35--c17fb751507e9dfc
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build_id: bd-c17fb751507e9dfc_1
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scan_id: sc-3b1b3932f9846892_1
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linux/arm64:
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name: community.wave.seqera.io/library/multiqc:1.35--3e45d17b40a576b4
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build_id: bd-3e45d17b40a576b4_1
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scan_id: sc-1d0cf4ed1a4b61e0_1
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name: community.wave.seqera.io/library/multiqc:1.35--5c84a5000a226ab5
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build_id: bd-5c84a5000a226ab5_1
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scan_id: sc-0d39df41e9737bbd_1
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singularity:
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linux/amd64:
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name: oras://community.wave.seqera.io/library/multiqc:1.35--cb7458fda84d6393
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build_id: bd-cb7458fda84d6393_1
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https: https://community-cr-prod.seqera.io/docker/registry/v2/blobs/sha256/12/1297c0f5075c19486da167ebf1b6136907d6b5339697b87b29fda335221785b3/data
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name: oras://community.wave.seqera.io/library/multiqc:1.35--c680f2aea25ccec2
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build_id: bd-c680f2aea25ccec2_1
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https: https://community-cr-prod.seqera.io/docker/registry/v2/blobs/sha256/c8/c8e346f4f6080eadf1253505e6ff09ef004454fc18e8d672006fd7b222cc412e/data
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linux/arm64:
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name: oras://community.wave.seqera.io/library/multiqc:1.35--f79e87603d312ac0
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build_id: bd-f79e87603d312ac0_1
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https: https://community-cr-prod.seqera.io/docker/registry/v2/blobs/sha256/c0/c007304153702edc622f1a76b41505e7fca65c7145e5b8b2ddce62a5c59af207/data
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name: oras://community.wave.seqera.io/library/multiqc:1.35--c0468833d65b2f81
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build_id: bd-c0468833d65b2f81_1
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https: https://community-cr-prod.seqera.io/docker/registry/v2/blobs/sha256/e4/e48aa28aebc881254a499b24c3e1ce77b8df1b85a5432699ed6f72eb17ac7fb5/data

modules/nf-core/multiqcsav/.conda-lock/linux_amd64-bd-d497f2c0ee14021c_1.txt renamed to modules/nf-core/multiqcsav/.conda-lock/linux_amd64-bd-9b10d606ce2f36b6_1.txt

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modules/nf-core/multiqcsav/.conda-lock/linux_arm64-bd-63d3faa1f4fa1fa6_1.txt renamed to modules/nf-core/multiqcsav/.conda-lock/linux_arm64-bd-077315907ed11315_1.txt

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modules/nf-core/multiqcsav/main.nf

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@@ -4,8 +4,8 @@ process MULTIQCSAV {
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conda "${moduleDir}/environment.yml"
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container "${workflow.containerEngine in ['singularity', 'apptainer'] && !task.ext.singularity_pull_docker_container
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? 'https://community-cr-prod.seqera.io/docker/registry/v2/blobs/sha256/80/80a772836e24ece3afc4eb53f6584a311000842e6323b8e725d37fd88b566768/data'
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: 'community.wave.seqera.io/library/multiqc_multiqc_sav_pip_interop:d497f2c0ee14021c'}"
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? 'https://community-cr-prod.seqera.io/docker/registry/v2/blobs/sha256/c1/c1311ac2bfb96d77487985fce321b25bbea85f574f9932b827ed6cafe7f75963/data'
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: 'community.wave.seqera.io/library/multiqc_multiqc_sav_pip_interop:9b10d606ce2f36b6'}"
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input:
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tuple val(meta), path(xml), path(interop_bin, stageAs: "InterOp/*"), path(extra_multiqc_files, stageAs: "?/*"), path(multiqc_config, stageAs: "?/*"), path(multiqc_logo), path(replace_names), path(sample_names)

modules/nf-core/multiqcsav/meta.yml

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@@ -140,24 +140,24 @@ maintainers:
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containers:
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conda:
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linux/amd64:
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lock_file: modules/nf-core/multiqcsav/.conda-lock/linux_amd64-bd-d497f2c0ee14021c_1.txt
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lock_file: modules/nf-core/multiqcsav/.conda-lock/linux_amd64-bd-9b10d606ce2f36b6_1.txt
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linux/arm64:
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lock_file: modules/nf-core/multiqcsav/.conda-lock/linux_arm64-bd-63d3faa1f4fa1fa6_1.txt
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lock_file: modules/nf-core/multiqcsav/.conda-lock/linux_arm64-bd-077315907ed11315_1.txt
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docker:
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linux/amd64:
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name: community.wave.seqera.io/library/multiqc_multiqc_sav_pip_interop:d497f2c0ee14021c
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build_id: bd-d497f2c0ee14021c_1
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scan_id: sc-872ef428e7dd759e_1
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name: community.wave.seqera.io/library/multiqc_multiqc_sav_pip_interop:9b10d606ce2f36b6
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build_id: bd-9b10d606ce2f36b6_1
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scan_id: sc-e07d8899984fea53_1
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linux/arm64:
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name: community.wave.seqera.io/library/multiqc_multiqc_sav_pip_interop:63d3faa1f4fa1fa6
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build_id: bd-63d3faa1f4fa1fa6_1
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scan_id: sc-d2c09f2fb4caa3ad_1
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name: community.wave.seqera.io/library/multiqc_multiqc_sav_pip_interop:077315907ed11315
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build_id: bd-077315907ed11315_1
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scan_id: sc-bd28ba4987c53bbe_1
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singularity:
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linux/amd64:
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name: oras://community.wave.seqera.io/library/multiqc_multiqc_sav_pip_interop:f4f70d0f966edec3
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build_id: bd-f4f70d0f966edec3_1
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https: https://community-cr-prod.seqera.io/docker/registry/v2/blobs/sha256/80/80a772836e24ece3afc4eb53f6584a311000842e6323b8e725d37fd88b566768/data
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name: oras://community.wave.seqera.io/library/multiqc_multiqc_sav_pip_interop:a26da1aa4e8d32a6
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build_id: bd-a26da1aa4e8d32a6_1
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https: https://community-cr-prod.seqera.io/docker/registry/v2/blobs/sha256/c1/c1311ac2bfb96d77487985fce321b25bbea85f574f9932b827ed6cafe7f75963/data
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linux/arm64:
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name: oras://community.wave.seqera.io/library/multiqc_multiqc_sav_pip_interop:8285dbf19c66f011
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build_id: bd-8285dbf19c66f011_1
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https: https://community-cr-prod.seqera.io/docker/registry/v2/blobs/sha256/20/20f8e844c2df1a8893ac3897249bf3166752c17c41822271c12a51821b13c685/data
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name: oras://community.wave.seqera.io/library/multiqc_multiqc_sav_pip_interop:d1ed21d66511158d
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build_id: bd-d1ed21d66511158d_1
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https: https://community-cr-prod.seqera.io/docker/registry/v2/blobs/sha256/05/053f6d8c55b57e04b654070a3bd6eaa90685590158019d35c16092d301b80cb1/data

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