Skip to content

Pull requests: nf-core/modules

New pull request New
185 Open 7,781 Closed
185 Open 7,781 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Assigned to nobody Loading
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

Add HDL h2 and rg modules
#10912 opened Mar 15, 2026 by lyh970817 • Draft
14 tasks done
Standardize agat/*
#10908 opened Mar 14, 2026 by LouisLeNezet Loading…
17 tasks
1
@LouisLeNezet
11
Migrate gfaffix version topics hackathon2026
#10905 opened Mar 14, 2026 by EfraMP Loading…
11 of 17 tasks
1
12
Fastavalidator topics migration hackathon2026
#10904 opened Mar 14, 2026 by EfraMP Loading…
6 of 17 tasks
1
10
Remove non-standard ext keys from jupyternotebook
#10895 opened Mar 13, 2026 by mahesh-panchal Loading…
17 tasks
Add variantextractor module
#10894 opened Mar 13, 2026 by sbreuch Loading…
11 of 14 tasks
1
1
Remove non-standard ext keys and model after quartonotebook Ready for Review
#10886 opened Mar 13, 2026 by mahesh-panchal Loading…
1 of 17 tasks
Migration to topics channels: diamond/blastp #10766
#10885 opened Mar 13, 2026 by LorenzoCampanelli1102 Loading…
16 tasks
1
8
Bamclipper topics migration
#10882 opened Mar 13, 2026 by santiagotariza Loading…
1
topic migration for deseq2 size/s
#10873 opened Mar 13, 2026 by lourdeslabrador Loading…
17 tasks
1
7
Migrate drep/compare module to topic channels
#10869 opened Mar 13, 2026 by ayirm • Draft
3 of 8 tasks
1
Add GCTA modules
#10863 opened Mar 13, 2026 by lyh970817 Loading…
14 of 17 tasks
13
Cnvpytor/partition topics migration
#10855 opened Mar 13, 2026 by gonzagrau Loading…
1
Dragen germline topics migration
#10853 opened Mar 13, 2026 by DogaTestere Loading…
3 of 8 tasks
1
5
Cnvpytor/importreaddepth
#10852 opened Mar 13, 2026 by daleor0917 Loading…
1
2
update doubletdetection topics channel size/s
#10850 opened Mar 13, 2026 by alanmmobbs93 • Draft
17 tasks
1
1
Migrate annosine to topic channels size/s
#10834 opened Mar 13, 2026 by garciafranciscomartn Loading…
1
3
topic migration crispresso2
#10827 opened Mar 13, 2026 by gmarenne Loading…
17 tasks
1
4
update module: duphold
#10822 opened Mar 13, 2026 by camlloyd Loading…
3 of 17 tasks
1
2
Topic migration dedup
#10814 opened Mar 13, 2026 by isgenome Loading…
1 of 17 tasks
1
@isgenome
1
new module: stitchr
#10812 opened Mar 13, 2026 by Clara0611 Loading…
9 of 11 tasks
1
fix calder version
#10810 opened Mar 13, 2026 by carolineclbcq-fr Loading…
17 tasks
1
@carolineclbcq-fr
Add REGENIE step1 and step2 modules with Wave containers and expanded GWAS tests
#10800 opened Mar 13, 2026 by lyh970817 Loading…
14 tasks done
3
Add rtgtools/cnveval module for CNV evaluation enhancement New feature or request hackathon2026
#10795 opened Mar 12, 2026 by SevaNur Loading…
12 of 14 tasks
1
@SevaNur
9
Update parabricks minimap2 for scnanoseq
#10788 opened Mar 12, 2026 by gburnett-nvidia Loading…
17 tasks
ProTip! Type g p on any issue or pull request to go back to the pull request listing page.