Test with latest-everything failed

Process completed with exit code 1.

Test with latest-everything failed

Process completed with exit code 1.

Test with latest-everything failed

Process completed with exit code 1.

Test with latest-everything failed

Process completed with exit code 1.

Test with latest-everything failed

Process completed with exit code 1.

Test with latest-everything failed

Process completed with exit code 1.

Test with latest-everything failed

Process completed with exit code 1.

Test with latest-everything failed

Process completed with exit code 1.

Test with latest-everything failed

Process completed with exit code 1.

Test with latest-everything failed

Process completed with exit code 1.

Test with latest-everything failed

Process completed with exit code 1.

Test with latest-everything failed

Process completed with exit code 1.

Test with latest-everything failed

Process completed with exit code 1.

Test with latest-everything failed

Process completed with exit code 1.

Test with latest-everything failed

Process completed with exit code 1.

Test with latest-everything failed

Process completed with exit code 1.

Test with latest-everything failed

Process completed with exit code 1.

Test with latest-everything failed

Process completed with exit code 1.

Test with latest-everything failed

Process completed with exit code 1.

Test with latest-everything failed

Process completed with exit code 1.

Process completed with exit code 1.

Test with 25.10.4 failed

Process completed with exit code 1.

Process completed with exit code 1.

Test with 25.10.4 failed

Process completed with exit code 1.

Canceling since a higher priority waiting request for Run nf-test-775 exists

Process completed with exit code 1.

Test with 25.10.4 failed

Process completed with exit code 1.

Canceling since a higher priority waiting request for Run nf-test-775 exists

The operation was canceled.

Canceling since a higher priority waiting request for Run nf-test-775 exists

The operation was canceled.

Canceling since a higher priority waiting request for Run nf-test-775 exists

The operation was canceled.

Canceling since a higher priority waiting request for Run nf-test-775 exists

The operation was canceled.

Canceling since a higher priority waiting request for Run nf-test-775 exists

The operation was canceled.

Canceling since a higher priority waiting request for Run nf-test-775 exists

The operation was canceled.

Process completed with exit code 1.

Canceling since a higher priority waiting request for Run nf-test-775 exists

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^aspnetcore-.*'] failed to complete successfully. Proceeding...

Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: ./setup-nextflow/subaction, actions/checkout@11bd71901bbe5b1630ceea73d27597364c9af683, actions/setup-java@8df1039502a15bceb9433410b1a100fbe190c53b, nf-core/setup-nf-test@v1. Actions will be forced to run with Node.js 24 by default starting June 2nd, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/

The command [sudo apt-get remove -y azure-cli google-chrome-stable firefox powershell mono-devel libgl1-mesa-dri --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^mongodb-.*' --fix-missing] failed to complete successfully. Proceeding...

The command [sudo apt-get remove -y '^dotnet-.*' --fix-missing] failed to complete successfully. Proceeding...