raredisease/modules/local/parse_contamination/meta.yml at d8a2ec09e468fad421878a95e1380a6a30c6c794 · nf-core/raredisease · GitHub

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name: parse_contamination
description: Parse GATK CalculateContamination output for MultiQC
keywords:
  - contamination
  - MultiQC
  - parsing
tools:
  - python:
      description: Python programming language
      homepage: https://www.python.org/
input:
  - meta:
      type: map
      description: Groovy Map containing sample information
  - contamination_table:
      type: file
      description: GATK CalculateContamination output table
      pattern: "*.contamination.table"
output:
  - mqc_table:
      type: file
      description: MultiQC custom content table
      pattern: "*_contamination_mqc.tsv"
  - versions:
      type: file
      description: File containing software versions
      pattern: "versions.yml"
authors:
  - "56053vujinovic"