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Non-stub pipeline level tests #869

@fellen31

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@fellen31

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For developers that are not very familiar with the raredisease codebase, having non-stub pipeline tests would help immensely to see how the output changes when making modifications to the code. If there are parts of the pipeline that would not be compatible (yet) with these tests, it should be clearly stated.

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    enhancementImprovement for existing functionality

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