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Fix fai channel #806

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Merged
apeltzer merged 2 commits into from
May 19, 2026
Merged

Fix fai channel #806

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23b2ef9
Fix fai channel
grst May 13, 2026
14f3656
update changelog
grst May 13, 2026
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6 changes: 5 additions & 1 deletion CHANGELOG.md
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Expand Up @@ -3,14 +3,18 @@
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).

## v4.2.0
## v4.2.0dev

### Added

### Fixed

- Fix channel join mismatch between `fa` and `fai` [#806](https://github.com/nf-core/rnafusion/pull/806)

### Changed

- Template update to v4.0.2 [#804](https://github.com/nf-core/rnafusion/pull/804)

## v4.1.0 - [2026-02-09]

### Added
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2 changes: 1 addition & 1 deletion subworkflows/local/build_references/main.nf
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Expand Up @@ -57,7 +57,7 @@ workflow BUILD_REFERENCES {
ch_versions = ch_versions.mix(SAMTOOLS_FAIDX.out.versions)
ch_fai = SAMTOOLS_FAIDX.out.fai
} else {
ch_fai = channel.fromPath(params.fai).map { that -> [[id:that.Name], that] }
ch_fai = channel.fromPath(params.fai).map { that -> [[id:that.Name.replaceFirst(/\.fai$/, '')], that] }
}

def ch_hgnc_date = channel.empty()
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