Add GPU accelerated STAR and Markdups (using Parabricks rna_fq2bam) #658
Triggered via pull request
January 30, 2026 14:29
Status
Cancelled
Total duration
2h 32m 50s
Artifacts
–
Annotations
66 errors and 13 warnings
|
docker | latest-everything | 14/14
Test with latest-everything failed
|
|
docker | latest-everything | 14/14
Process completed with exit code 1.
|
|
docker | 25.04.0 | 14/14
Process completed with exit code 1.
|
|
docker | 25.04.0 | 14/14
Test with 25.04.0 failed
|
|
docker | 25.04.0 | 14/14
Process completed with exit code 1.
|
|
docker | 25.04.0 | 8/14
Process completed with exit code 1.
|
|
docker | 25.04.0 | 8/14
Test with 25.04.0 failed
|
|
docker | 25.04.0 | 8/14
Process completed with exit code 1.
|
|
docker | latest-everything | 8/14
Test with latest-everything failed
|
|
docker | latest-everything | 8/14
Process completed with exit code 1.
|
|
docker | 25.04.0 | 9/14
Process completed with exit code 1.
|
|
docker | 25.04.0 | 9/14
Test with 25.04.0 failed
|
|
docker | 25.04.0 | 9/14
Process completed with exit code 1.
|
|
docker | latest-everything | 9/14
Test with latest-everything failed
|
|
docker | latest-everything | 9/14
Process completed with exit code 1.
|
|
docker | 25.04.0 | 7/14
Process completed with exit code 1.
|
|
docker | 25.04.0 | 7/14
Test with 25.04.0 failed
|
|
docker | 25.04.0 | 7/14
Process completed with exit code 1.
|
|
docker | latest-everything | 3/14
Test with latest-everything failed
|
|
docker | latest-everything | 3/14
Process completed with exit code 1.
|
|
docker | 25.04.0 | 10/14
Process completed with exit code 1.
|
|
docker | 25.04.0 | 10/14
Test with 25.04.0 failed
|
|
docker | 25.04.0 | 10/14
Process completed with exit code 1.
|
|
docker | latest-everything | 10/14
Test with latest-everything failed
|
|
docker | latest-everything | 10/14
Process completed with exit code 1.
|
|
docker | 25.04.0 | 1/14
Process completed with exit code 1.
|
|
docker | 25.04.0 | 1/14
Test with 25.04.0 failed
|
|
docker | 25.04.0 | 1/14
Process completed with exit code 1.
|
|
docker | 25.04.0 | 3/14
Process completed with exit code 1.
|
|
docker | 25.04.0 | 3/14
Test with 25.04.0 failed
|
|
docker | 25.04.0 | 3/14
Process completed with exit code 1.
|
|
docker | latest-everything | 7/14
Test with latest-everything failed
|
|
docker | latest-everything | 7/14
Process completed with exit code 1.
|
|
docker | 25.04.0 | 6/14
Process completed with exit code 1.
|
|
docker | 25.04.0 | 6/14
Test with 25.04.0 failed
|
|
docker | 25.04.0 | 6/14
Process completed with exit code 1.
|
|
docker | latest-everything | 1/14
Test with latest-everything failed
|
|
docker | latest-everything | 1/14
Process completed with exit code 1.
|
|
docker | latest-everything | 6/14
Test with latest-everything failed
|
|
docker | latest-everything | 6/14
Process completed with exit code 1.
|
|
docker | latest-everything | 12/14
Test with latest-everything failed
|
|
docker | latest-everything | 12/14
Process completed with exit code 1.
|
|
docker | 25.04.0 | 5/14
Process completed with exit code 1.
|
|
docker | 25.04.0 | 5/14
Test with 25.04.0 failed
|
|
docker | 25.04.0 | 5/14
Process completed with exit code 1.
|
|
docker | latest-everything | 5/14
Test with latest-everything failed
|
|
docker | latest-everything | 5/14
Process completed with exit code 1.
|
|
docker | 25.04.0 | 12/14
Process completed with exit code 1.
|
|
docker | 25.04.0 | 12/14
Test with 25.04.0 failed
|
|
docker | 25.04.0 | 12/14
Process completed with exit code 1.
|
|
docker | latest-everything | 2/14
Test with latest-everything failed
|
|
docker | latest-everything | 2/14
Process completed with exit code 1.
|
|
docker | latest-everything | 13/14
Test with latest-everything failed
|
|
docker | latest-everything | 13/14
Process completed with exit code 1.
|
|
docker | 25.04.0 | 2/14
Process completed with exit code 1.
|
|
docker | 25.04.0 | 2/14
Test with 25.04.0 failed
|
|
docker | 25.04.0 | 2/14
Process completed with exit code 1.
|
|
docker | 25.04.0 | 13/14
Process completed with exit code 1.
|
|
docker | 25.04.0 | 13/14
Test with 25.04.0 failed
|
|
docker | 25.04.0 | 13/14
Process completed with exit code 1.
|
|
docker | latest-everything | 4/14
Test with latest-everything failed
|
|
docker | latest-everything | 4/14
Process completed with exit code 1.
|
|
docker | 25.04.0 | 4/14
Canceling since a higher priority waiting request for Run nf-test-1685 exists
|
|
docker | 25.04.0 | 4/14
The operation was canceled.
|
|
confirm-pass
Process completed with exit code 1.
|
|
Run nf-test
Canceling since a higher priority waiting request for Run nf-test-1685 exists
|
|
docker | latest-everything | 14/14
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
|
|
docker | latest-everything | 8/14
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
|
|
docker | latest-everything | 9/14
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
|
|
docker | latest-everything | 3/14
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
|
|
docker | latest-everything | 10/14
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
|
|
docker | latest-everything | 7/14
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
|
|
docker | latest-everything | 1/14
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
|
|
docker | latest-everything | 6/14
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
|
|
docker | latest-everything | 12/14
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
|
|
docker | latest-everything | 5/14
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
|
|
docker | latest-everything | 2/14
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
|
|
docker | latest-everything | 13/14
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
|
|
docker | latest-everything | 4/14
Test with latest-everything failed but will not cause workflow failure. Please check if the error is expected or if it needs fixing.
|