Update tests/contaminant_screening_input.nf.test

EladH1 · pinin4fjords · web-flow · commit 5084a4502eaa · 2026-06-29T14:20:00.000+02:00
Co-authored-by: Jonathan Manning &lt;jonathan.manning@seqera.io&gt;
diff --git a/tests/contaminant_screening_input.nf.test b/tests/contaminant_screening_input.nf.test
@@ -103,7 +103,7 @@ nextflow_pipeline {
                 { assert snapshot(
                     workflow.trace.succeeded().size(),
                     removeFromYamlMap("$outputDir/pipeline_info/nf_core_rnaseq_software_mqc_versions.yml", "Workflow"),
-                    stable_name,
+                    removeFromYamlMap("$outputDir/pipeline_info/nf_core_rnaseq_software_mqc_versions.yml", "Workflow").findAll { it.key != "KRAKEN2" },
                     stable_path
                 ).match() }
             )

Original file line number	Diff line number	Diff line change
`@@ -103,7 +103,7 @@ nextflow_pipeline {`
`103`	`103`	`{ assert snapshot(`
`104`	`104`	`workflow.trace.succeeded().size(),`
`105`	`105`	`removeFromYamlMap("$outputDir/pipeline_info/nf_core_rnaseq_software_mqc_versions.yml", "Workflow"),`
`106`		`- stable_name,`
	`106`	`+ removeFromYamlMap("$outputDir/pipeline_info/nf_core_rnaseq_software_mqc_versions.yml", "Workflow").findAll { it.key != "KRAKEN2" },`
`107`	`107`	`stable_path`
`108`	`108`	`).match() }`
`109`	`109`	`)`