Improve citation system to dynamically build tool citations#237
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maxulysse wants to merge 13 commits into
Open
Improve citation system to dynamically build tool citations#237maxulysse wants to merge 13 commits into
maxulysse wants to merge 13 commits into
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- Add toolCitationMap and toolBibliographyMap for centralized tool references - Update toolCitationText and toolBibliographyText to accept tools parameter - Dynamically build citations based on selected tools - Add sample_size parameter to defineToolsList for seqtk_sample inclusion
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- Join tool_bibliography list to string for proper template rendering - Wrap all URLs in toolBibliographyMap with anchor tags and target=_blank - Add missing DOIs for bwamem2 and samtools - Clean up toolReferencesText to return sorted list instead of joined string
- Add descriptions for BBMap, FASTQE, FQ, MultiQC SAV, Rundirparser, Seqtk, ToulligQC - Update BWAMEM2 and SAMTOOLS links to use DOI URLs
- Update DOI to 10.1109/IPDPS.2019.00041 - Add URL: https://github.com/bwa-mem2/bwa-mem2
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Refactor citation system to dynamically build tool citations based on selected tools.
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