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Drop python 3.8, add tests with python 3.13

Status: Open (in progress).

nf-core/toolsnumber 3538

#3538 In nf-core/tools;

· mashehu opened on Apr 15, 2025

'modules lint' and 'subworkflow lint' should also ignore files from .gitignore

linting

Status: Open.

#3529 In nf-core/tools;

· Gullumluvl opened on Apr 3, 2025

Add ability to install a subworkflow composed nf-core and non-nfcore modules/subworkflows.

enhancement

high-priority

Status: Open.

#3175 In nf-core/tools;

· kenibrewer opened on Sep 17, 2024

Subworkflow install failure still results in a 0 exit code

bugSomething isn't workingSomething isn't working

high-priority

Status: Open.

#3044 In nf-core/tools;

· jvfe opened on Jul 1, 2024

Add nf-core configs create sub command (attempt 2)

Status: Draft (not ready).

nf-core/toolsnumber 3001

#3001 In nf-core/tools;

· jfy133 opened on May 25, 2024

Add --no-tests flag to nf-core modules install

nf-test

pipeline-testing

Status: Open.

#2492 In nf-core/tools;

· edmundmiller opened on Oct 24, 2023