Update to newest state of main by HendrikBorgelt · Pull Request #91 · nfdi-de/chem-dcat-ap

HendrikBorgelt · 2026-01-28T10:51:53Z

No description provided.

according to draw.io mind map

…ed classes according to draw.io mind map. Put needed MaterialEntity class in own schema yaml for potential better reuse by others and better overview.

as having these in the material_entites_ap.yaml or chemical_entites_ap.yaml seemed less suitable atm.

Bumps [actions/checkout](https://github.com/actions/checkout) from 4.2.2 to 5.0.0. - [Release notes](https://github.com/actions/checkout/releases) - [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md) - [Commits](actions/checkout@11bd719...08c6903) --- updated-dependencies: - dependency-name: actions/checkout dependency-version: 5.0.0 dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com>

Bumps [actions/download-artifact](https://github.com/actions/download-artifact) from 4.3.0 to 5.0.0. - [Release notes](https://github.com/actions/download-artifact/releases) - [Commits](actions/download-artifact@d3f86a1...634f93c) --- updated-dependencies: - dependency-name: actions/download-artifact dependency-version: 5.0.0 dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com>

Bumps [actions/setup-python](https://github.com/actions/setup-python) from 5.6.0 to 6.0.0. - [Release notes](https://github.com/actions/setup-python/releases) - [Commits](actions/setup-python@a26af69...e797f83) --- updated-dependencies: - dependency-name: actions/setup-python dependency-version: 6.0.0 dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com>

Bumps [pypa/gh-action-pypi-publish](https://github.com/pypa/gh-action-pypi-publish) from 1.12.4 to 1.13.0. - [Release notes](https://github.com/pypa/gh-action-pypi-publish/releases) - [Commits](pypa/gh-action-pypi-publish@76f52bc...ed0c539) --- updated-dependencies: - dependency-name: pypa/gh-action-pypi-publish dependency-version: 1.13.0 dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com>

…/setup-python-6.0.0 Bump actions/setup-python from 5.6.0 to 6.0.0

…-action-pypi-publish-1.13.0 Bump pypa/gh-action-pypi-publish from 1.12.4 to 1.13.0

…/download-artifact-5.0.0 Bump actions/download-artifact from 4.3.0 to 5.0.0

…/checkout-5.0.0 Bump actions/checkout from 4.2.2 to 5.0.0

Bumps [actions/checkout](https://github.com/actions/checkout) from 5.0.0 to 6.0.0. - [Release notes](https://github.com/actions/checkout/releases) - [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md) - [Commits](actions/checkout@08c6903...1af3b93) --- updated-dependencies: - dependency-name: actions/checkout dependency-version: 6.0.0 dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com>

Bumps [actions/setup-python](https://github.com/actions/setup-python) from 6.0.0 to 6.1.0. - [Release notes](https://github.com/actions/setup-python/releases) - [Commits](actions/setup-python@e797f83...83679a8) --- updated-dependencies: - dependency-name: actions/setup-python dependency-version: 6.1.0 dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com>

Bumps [rossjrw/pr-preview-action](https://github.com/rossjrw/pr-preview-action) from 1.6.2 to 1.6.3. - [Release notes](https://github.com/rossjrw/pr-preview-action/releases) - [Commits](rossjrw/pr-preview-action@9f77b1d...8ff09e4) --- updated-dependencies: - dependency-name: rossjrw/pr-preview-action dependency-version: 1.6.3 dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com>

Bumps [astral-sh/setup-uv](https://github.com/astral-sh/setup-uv) from 6.4.3 to 7.1.4. - [Release notes](https://github.com/astral-sh/setup-uv/releases) - [Commits](astral-sh/setup-uv@v6.4.3...v7.1.4) --- updated-dependencies: - dependency-name: astral-sh/setup-uv dependency-version: 7.1.4 dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com>

Bumps [actions/upload-artifact](https://github.com/actions/upload-artifact) from 4.6.2 to 5.0.0. - [Release notes](https://github.com/actions/upload-artifact/releases) - [Commits](actions/upload-artifact@v4.6.2...v5.0.0) --- updated-dependencies: - dependency-name: actions/upload-artifact dependency-version: 5.0.0 dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com>

and also delete the representations, we are currently not supporting

ttl output is dropped because of UV migration --> needs to be added to the project.Justfile

#63 rename dcat-4C-ap / dcat_4c_ap to chem-dcat-ap/chem_dcat_ap everywhere

updated the schemas for their new w3ids

Bumps [actions/checkout](https://github.com/actions/checkout) from 6.0.0 to 6.0.1. - [Release notes](https://github.com/actions/checkout/releases) - [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md) - [Commits](actions/checkout@v6.0.0...v6.0.1) --- updated-dependencies: - dependency-name: actions/checkout dependency-version: 6.0.1 dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com>

Bumps [astral-sh/setup-uv](https://github.com/astral-sh/setup-uv) from 7.1.4 to 7.1.6. - [Release notes](https://github.com/astral-sh/setup-uv/releases) - [Commits](astral-sh/setup-uv@v7.1.4...v7.1.6) --- updated-dependencies: - dependency-name: astral-sh/setup-uv dependency-version: 7.1.6 dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com>

Bumps [rossjrw/pr-preview-action](https://github.com/rossjrw/pr-preview-action) from 1.6.3 to 1.8.0. - [Release notes](https://github.com/rossjrw/pr-preview-action/releases) - [Commits](rossjrw/pr-preview-action@v1.6.3...v1.8.0) --- updated-dependencies: - dependency-name: rossjrw/pr-preview-action dependency-version: 1.8.0 dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com>

Bumps [actions/upload-artifact](https://github.com/actions/upload-artifact) from 5.0.0 to 6.0.0. - [Release notes](https://github.com/actions/upload-artifact/releases) - [Commits](actions/upload-artifact@v5.0.0...v6.0.0) --- updated-dependencies: - dependency-name: actions/upload-artifact dependency-version: 6.0.0 dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com>

Bumps [actions/download-artifact](https://github.com/actions/download-artifact) from 6.0.0 to 7.0.0. - [Release notes](https://github.com/actions/download-artifact/releases) - [Commits](actions/download-artifact@v6.0.0...v7.0.0) --- updated-dependencies: - dependency-name: actions/download-artifact dependency-version: 7.0.0 dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com>

github-actions · 2026-01-28T10:52:49Z

PR Preview Action v1.8.0
🚀 View preview at https://nfdi-de.github.io/chem-dcat-ap/pr-preview/pr-91/
Built to branch `gh-pages` at 2026-01-28 10:52 UTC. Preview will be ready when the GitHub Pages deployment is complete.

dalito · 2026-01-28T11:22:32Z

Can you add the .idea/ folder to .gitignore to exclude its files from being git-tracked?

StroemPhi and others added 30 commits July 2, 2025 10:39

Add material entity/sample AP and example

7e5352c

Put ChemicalReaction in own yaml and add needed classes

c00f63d

according to draw.io mind map

Put ChemicalSubstance & ChemicalEntity in own yaml and add other need…

95a3087

…ed classes according to draw.io mind map. Put needed MaterialEntity class in own schema yaml for potential better reuse by others and better overview.

Put NMR specif stuff in own yaml

9b38584

Clean up dcat_4c_ap (deleting whitespace and unneeded comments)

8176362

Fix ID to be the IRI that is actually resolvable

14e2496

Update prefix map

d43645f

Update imports to reflect new modularization

331125a

Improve mapping of Laboratory using ENVO instead of PROV

533f1ca

Declare SubstanceSample and PolymerSample rather in 4C main schema

b7e795f

as having these in the material_entites_ap.yaml or chemical_entites_ap.yaml seemed less suitable atm.

Add example instance of a chemical SubstanceSample

dd09e75

Update MaterialSample-001.yaml

857684b

Update Examples

094da5e

Update dcat_4c_ap.yaml

0cf9f9f

Update chemical_reaction_ap.yaml

17ac261

Update chemical_entities_ap.yaml

7c998d0

Update material_entities_ap.yaml

cd0df5e

Update nmr_michi.yaml

d6f2a04

Update README.md

8d755a4

Update link to GH pages

4f00ffe

Merge pull request #50 from nfdi-de/dependabot/github_actions/actions…

859bb52

…/setup-python-6.0.0 Bump actions/setup-python from 5.6.0 to 6.0.0

Merge pull request #51 from nfdi-de/dependabot/github_actions/pypa/gh…

d089beb

…-action-pypi-publish-1.13.0 Bump pypa/gh-action-pypi-publish from 1.12.4 to 1.13.0

Merge pull request #49 from nfdi-de/dependabot/github_actions/actions…

8ca3f27

…/download-artifact-5.0.0 Bump actions/download-artifact from 4.3.0 to 5.0.0

Merge pull request #48 from nfdi-de/dependabot/github_actions/actions…

6f171c7

…/checkout-5.0.0 Bump actions/checkout from 4.2.2 to 5.0.0

Delete .idea/ folder from repo

74122c3

Update URLs/IRIs to new NFDI-de GH repo

c6103a8

dalito and others added 27 commits December 2, 2025 09:42

Update location of copier-template to match move

bb2027c

Update template to v0.4.1 (latest release) which adds uv

2c579e7

Add uv.lock file

697346f

Clean-up: poetry->uv and dalito->linkml repo migrations

6926d22

Refactor dcat_4c-ap to chem_dcat_ap everywhere

f1edbb1

Update README.md

2a72f46

Update generated artifacts to reflect renaming

a776290

and also delete the representations, we are currently not supporting

Update examples

f714094

ttl output is dropped because of UV migration --> needs to be added to the project.Justfile

Use title without hyphen as in the paper

be972bc

Fix wrong URI in docs/index.md

32c019a

Use hyphen in name project.toml, uv.lock and chem_dcat_ap.yaml

4a791c5

Regen artifacts to reflect hyphen change

fd703c6

Merge pull request #77 from nfdi-de/#63-rename-to-chem-dcat-ap

4762fd7

#63 rename dcat-4C-ap / dcat_4c_ap to chem-dcat-ap/chem_dcat_ap everywhere

Change to multi version schema docs

b99219d

Update Zenodo data based on release 0.1.0rc1

b86ffb3

updated the schemas for their new w3ids

5c27954

Merge pull request #82 from HendrikBorgelt/w3id_changes

ed81866

updated the schemas for their new w3ids

HendrikBorgelt closed this Jan 28, 2026

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Update to newest state of main - #91

Update to newest state of main#91
HendrikBorgelt wants to merge 123 commits into
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HendrikBorgelt commented Jan 28, 2026

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Built to branch `gh-pages` at 2026-01-28 10:52 UTC.
Preview will be ready when the GitHub Pages deployment is complete.