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MSMC_clustering
MSMC_clustering PublicClass for reading MSMC2 or tsv time series data and time series clustering using tslearn.
Python
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squiggles
squiggles PublicTime series clustering webapp for use with MSMC output data. K-means model is trained on B10K data.
Python
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goofy_scripts
goofy_scripts PublicWell documented but horrendously coded scripts for single cell analysis.
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MSMC_exploratory_analysis
MSMC_exploratory_analysis PublicExploratory analyses such as experiments on clustering time series and ANOVA/linear model tests on trait data and cluster results.
Jupyter Notebook
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