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Lyuba Zehl edited this page Dec 3, 2020 · 64 revisions

OVERVIEW

actors miscellaneous research
contribution.schema.tpl.json digitalIdentifier.schema.tpl.json parameterSetting.schema.tpl.json
organization.schema.tpl.json digitalIdentifierSchema.schema.tpl.json protocol.schema.tpl.json
person.schema.tpl.json funding.schema.tpl.json protocolExecution.schema.tpl.json
data quantitativeValue.schema.tpl.json specimen.schema.tpl.json
contentType.schema.tpl.json quantitativeValueRange.schema.tpl.json specimenSet.schema.tpl.json
copyright.schema.tpl.json products specimenState.schema.tpl.json
fileBundle.schema.tpl.json dataset.schema.tpl.json subject.schema.tpl.json
fileInstance.schema.tpl.json datasetVersion.schema.tpl.json subjectGroup.schema.tpl.json
fileRepository.schema.tpl.json model.schema.tpl.json subjectGroupState.schema.tpl.json
hash.schema.tpl.json modelVersion.schema.tpl.json subjectState.schema.tpl.json
license.schema.tpl.json project.schema.tpl.json tissueSample.schema.tpl.json
researchProduct.schema.tpl.json tissueSampleCollection.schema.tpl.json
software.schema.tpl.json tissueSampleCollectionState.schema.tpl.json
softwareVersion.schema.tpl.json tissueSampleState.schema.tpl.json

ACTORS

https://openminds.ebrains.eu/core/Contribution

property expects count
contributor object (type: "https://openminds.ebrains.eu/core/Person"|"https://openminds.ebrains.eu/core/Organization") 1 - 1
contributionType object (type: "https://openminds.ebrains.eu/controlledTerms/ContributionType") 1 - n

For more details have a look at the raw contribution.schema.tpl.json.
Back to OVERVIEW or top of ACTORS.

https://openminds.ebrains.eu/core/Organization

property expects count
digitalIdentifier object (type: "https://openminds.ebrains.eu/core/DigitalIdentifier") 0 - n
fullName string (free text) 1 - 1
homepage string (pattern: IRI) 0 - 1
shortName string (free text) 0 - 1
parentOrganization object (type: "https://openminds.ebrains.eu/core/Organization") 0 - n

For more details have a look at the raw organization.schema.tpl.json.
Back to OVERVIEW or top of ACTORS.

https://openminds.ebrains.eu/core/Person

property expects count
email string (format: email) 1 - 1
familyName string (free text) 0 - 1
givenName string (free text) 1 - 1
digitalIdentifier object (type: "https://openminds.ebrains.eu/core/DigitalIdentifier") 0 - n

For more details have a look at the raw person.schema.tpl.json.
Back to OVERVIEW or top of ACTORS.

DATA

https://openminds.ebrains.eu/core/ContentType

property expects count
associatedFileExtension string (free text) 1 - n
category string (free text) 1 - 1
ianaRef string (format: IRI) 0 - n
name string (free text) 1 - 1
synonyms string (free text) 0 - n

For more details have a look at the raw contentType.schema.tpl.json.
Back to OVERVIEW or top of DATA.

https://openminds.ebrains.eu/core/Copyright

property expects count
holder object (type: "https://openminds.ebrains.eu/core/Person"|"https://openminds.ebrains.eu/core/Organization") 1 - n
year string (pattern: ([0-9]{4}])) 0 - n

For more details have a look at the raw copyright.schema.tpl.json.
Back to OVERVIEW or top of DATA.

https://openminds.ebrains.eu/core/FileBundle

property expects count
contentType object (type: "https://openminds.ebrains.eu/core/ContentType") 0 - 1
groupedBy object (type: "https://openminds.ebrains.eu/controlledTerms/FileBundleGrouping") 0 - 1
hash object (type: "https://openminds.ebrains.eu/core/Hash") 1 - 1
isPartOf object (type: "https://openminds.ebrains.eu/core/FileBundle"|"https://openminds.ebrains.eu/core/FileRepository") 1 - 1
name string (free text) 1 - 1
resourceLocator string (format: IRI) 1 - 1
storageSize object (type: "https://openminds.ebrains.eu/core/QuantitativeValue")) 1 - 1

For more details have a look at the raw fileBundle.schema.tpl.json.
Back to OVERVIEW or top of DATA.

https://openminds.ebrains.eu/core/FileInstance

property expects count
contentType object (type: "https://openminds.ebrains.eu/core/ContentType") 0 - 1
hash object (type: "https://openminds.ebrains.eu/core/Hash") 1 - 1
isPartOf object (type: "https://openminds.ebrains.eu/core/FileBundle") 1 - 1
name string (free text) 1 - 1
resourceLocator string (format: IRI) 1 - 1
storageSize object (type: "https://openminds.ebrains.eu/core/QuantitativeValue")) 1 - 1

For more details have a look at the raw fileInstance.schema.tpl.json.
Back to OVERVIEW or top of DATA.

https://openminds.ebrains.eu/core/FileRepository

property expects count
contentType object (type: "https://openminds.ebrains.eu/core/ContentType") 0 - 1
hash object (type: "https://openminds.ebrains.eu/core/Hash") 1 - 1
name string (free text) 1 - 1
hostedBy object (type: "https://openminds.ebrains.eu/core/Organization") 1 - 1
resourceLocator string (format: IRI) 1 - 1
storageSize object (type: "https://openminds.ebrains.eu/core/QuantitativeValue")) 1 - 1

For more details have a look at the raw fileRepository.schema.tpl.json.
Back to OVERVIEW or top of DATA.

https://openminds.ebrains.eu/core/Hash

property expects count
digest string (free text) 1 - 1
algorithm string (free text) 1 - 1

For more details have a look at the raw hash.schema.tpl.json.
Back to OVERVIEW or top of DATA.

https://openminds.ebrains.eu/core/license

property expects count
disclaimer string (format: IRI) 0 - 1
fullName string (free text) 1 - 1
legalCode string (format: IRI) 1 - 1
shortName string (free text) 1 - 1

For more details have a look at the raw license.schema.tpl.json.
Back to OVERVIEW or top of DATA.

MISCELLANEOUS

https://openminds.ebrains.eu/core/DigitalIdentifier

property expects count
identifier string (free text) 1 - 1
howToCite string (free text) 0 - 1
identifierSchema object (type: "https://openminds.ebrains.eu/core/DigitalIdentifierSchema")) 1 - 1

For more details have a look at the raw digitalIdentifier.schema.tpl.json.
Back to OVERVIEW or top of MISCELLANEOUS.

https://openminds.ebrains.eu/core/DigitalIdentifierSchema

property expects count
type string (free text) 1 - 1
IRI string (format: IRI) 0 - 1
identifierPattern string (format: IRI) 0 - 1

For more details have a look at the raw digitalIdentifierSchema.schema.tpl.json.
Back to OVERVIEW or top of MISCELLANEOUS.

https://openminds.ebrains.eu/core/Funding

property expects count
acknowledgement string (free text) 0 - 1
awardNumber string (free text) 0 - 1
awardTitle string (free text) 0 - 1
funder object (type: "https://openminds.ebrains.eu/core/Organization")) 1 - 1

For more details have a look at the raw funding.schema.tpl.json.
Back to OVERVIEW or top of MISCELLANEOUS.

https://openminds.ebrains.eu/core/QuantitativeValue

property expects count
value number 1 - 1
uncertainty number 0 - 2
unit object (type: "https://openminds.ebrains.eu/controlledTerms/UnitOfMeasurement")) 0 - 1

For more details have a look at the raw quantitativeValue.schema.tpl.json.
Back to OVERVIEW or top of MISCELLANEOUS.

https://openminds.ebrains.eu/core/QuantitativeValueRange

property expects count
maxValue object (type: "https://openminds.ebrains.eu/core/QuantitativeValue") 1 - 1
minValue object (type: "https://openminds.ebrains.eu/core/QuantitativeValue") 1 - 1

For more details have a look at the raw quantitativeValueRange.schema.tpl.json.
Back to OVERVIEW or top of MISCELLANEOUS.

PRODUCTS

https://openminds.ebrains.eu/core/Dataset

property expects count
hasVersions object (type: "https://openminds.ebrains.eu/core/DatasetVersion") 1 - n

This schema extends the abstract schema researchProduct. For more details have a look at the raw dataset.schema.tpl.json.
Back to OVERVIEW or top of PRODUCTS.

https://openminds.ebrains.eu/core/DatasetVersion

property expects count
ethicsAssessment object (type: "https://openminds.ebrains.eu/controlledTerms/EthicsAssessment") 1 - 1
hasAlternativeVersions object (type: "https://openminds.ebrains.eu/core/DatasetVersion") 0 - n
hasSupplementVersions object (type: "https://openminds.ebrains.eu/core/DatasetVersion") 0 - n
isNewVersionOf object (type: "https://openminds.ebrains.eu/core/DatasetVersion") 0 - 1
modality object (type: "https://openminds.ebrains.eu/controlledTerms/Modality") 1 - n
type object (type: "https://openminds.ebrains.eu/controlledTerms/DatasetType") 1 - n

This schema extends the abstract schema researchProductVersion with required authors and custodians. For more details have a look at the raw datasetVersion.schema.tpl.json.
Back to OVERVIEW or top of PRODUCTS.

https://openminds.ebrains.eu/core/Model

property expects count
hasVersions object (type: "https://openminds.ebrains.eu/core/ModelVersion") 1 - n

This schema extends the abstract schema researchProduct. For more details have a look at the raw model.schema.tpl.json.
Back to OVERVIEW or top of PRODUCTS.

https://openminds.ebrains.eu/core/ModelVersion

property expects count
abstractionLevel object (type: "https://openminds.ebrains.eu/controlledTerms/ModelAbstractionLevel") 1 - 1
format object (type: "https://openminds.ebrains.eu/core/ContentType") 1 - 1
hasAlternativeVersions object (type: "https://openminds.ebrains.eu/core/DatasetVersion") 0 - n
hasSupplementVersions object (type: "https://openminds.ebrains.eu/core/DatasetVersion") 0 - n
inputDataset object (type: "https://openminds.ebrains.eu/core/DatasetVersion") 0 - 1
isNewVersionOf object (type: "https://openminds.ebrains.eu/core/DatasetVersion") 0 - 1
scope object (type: "https://openminds.ebrains.eu/controlledTerms/ModelScope") 1 - n
studyTarget object (type: "https://openminds.ebrains.eu/controlledTerms/BiologicalSex"|"https://openminds.ebrains.eu/controlledTerms/Disease"|"https://openminds.ebrains.eu/controlledTerms/Genotype"|"https://openminds.ebrains.eu/controlledTerms/Phenotype"|"https://openminds.ebrains.eu/controlledTerms/Species"|"https://openminds.ebrains.eu/controlledTerms/TermSuggestion"|"https://openminds.ebrains.eu/sands/AnatomicalEntity") 1 - n

This schema extends the abstract schema researchProductVersion with required developers. For more details have a look at the raw modelVersion.schema.tpl.json.
Back to OVERVIEW or top of PRODUCTS.

https://openminds.ebrains.eu/core/Project

property expects count
description string (free text) 1 - 1
fullName string (free text) 1 - 1
hasResearchProducts object (type: "https://openminds.ebrains.eu/core/Dataset"|"https://openminds.ebrains.eu/core/Model"|"https://openminds.ebrains.eu/core/Software"|"https://openminds.ebrains.eu/core/DatasetVersion"|"https://openminds.ebrains.eu/core/ModelVersion"|"https://openminds.ebrains.eu/core/SoftwareVersion") 2 - n
homepage string (format: IRI) 0 - 1
projectLeader object (type: "https://openminds.ebrains.eu/core/Person"|"https://openminds.ebrains.eu/core/Organization") 0 - n
shortName string (free text) 1 - 1

For more details have a look at the raw project.schema.tpl.json.
Back to OVERVIEW or top of PRODUCTS.

https://openminds.ebrains.eu/core/researchProduct

property expects count
description string (free text) 1 - 1
digitalIdentifier object (type: "https://openminds.ebrains.eu/core/DigitalIdentifier") 1 - 1
fullName string (free text) 1 - 1
homepage string (format: IRI) 0 - 1
shortName string (free text) 1 - 1

For more details have a look at the raw researchProduct.schema.tpl.json.
Back to OVERVIEW or top of PRODUCTS.

https://openminds.ebrains.eu/core/researchProductVersion

property expects count
accessibility object (type: "https://openminds.ebrains.eu/controlledTerms/ProductAccessibility") 1 - 1
authors object (type: "https://openminds.ebrains.eu/core/Person"|"https://openminds.ebrains.eu/core/Organization") 0 - n
custodians object (type: "https://openminds.ebrains.eu/core/Person"|"https://openminds.ebrains.eu/core/Organization") 0 - n
description string (free text) 1 - 1
developers object (type: "https://openminds.ebrains.eu/core/Person"|"https://openminds.ebrains.eu/core/Organization") 0 - n
digitalIdentifier object (type: "https://openminds.ebrains.eu/core/DigitalIdentifier") 1 - 1
fullDocumentation object (type: "https://openminds.ebrains.eu/core/DigitalIdentifier" 1 - 1
fullName string (free text) 1 - 1
funding object (type: "https://openminds.ebrains.eu/core/Funding") 1 - n
homepage string (format: IRI) 0 - 1
license object (type: "https://openminds.ebrains.eu/core/License") 1 - 1
otherContributions object (type: "https://openminds.ebrains.eu/core/Contributions") 0 - n
relatedPublications object (type: "https://openminds.ebrains.eu/core/DigitalIdentifier") 0 - n
releaseDate string (format: date) 1 - 1
repository object (type: "https://openminds.ebrains.eu/core/FileRepository") 1 - 1
shortName string (free text) 1 - 1
versionIdentifier string (free text) 1 - 1
versionInnovations string (free text) 1 - 1

For more details have a look at the raw researchProductVersion.schema.tpl.json.
Back to OVERVIEW or top of PRODUCTS.

https://openminds.ebrains.eu/core/Software

property expects count
hasVersions object (type: "https://openminds.ebrains.eu/core/SoftwareVersion") 1 - n

This schema extends the abstract schema researchProduct. For more details have a look at the raw software.schema.tpl.json.
Back to OVERVIEW or top of PRODUCTS.

https://openminds.ebrains.eu/core/SoftwareVersion

property expects count
applicationCategory object (type: "https://openminds.ebrains.eu/controlledTerms/ApplicationCategory") 1 - 1
copyright object (type: "https://openminds.ebrains.eu/core/Copyright") 1 - 1
device object (type: "https://openminds.ebrains.eu/core/OperatingDevice") 1 - 1
hasAlternativeVersions object (type: "https://openminds.ebrains.eu/core/DatasetVersion") 0 - n
hasFeature object (type: "https://openminds.ebrains.eu/controlledTerms/SoftwareFeature") 1 - n
hasSupplementVersions object (type: "https://openminds.ebrains.eu/core/DatasetVersion") 0 - n
inputFormat object (type: "https://openminds.ebrains.eu/core/ContentType") 0 - 1
isNewVersionOf object (type: "https://openminds.ebrains.eu/core/DatasetVersion") 0 - 1
language object (type: "https://openminds.ebrains.eu/controlledTerms/Language") 1 - n
operatingSystem object (type: "https://openminds.ebrains.eu/controlledTerms/OperatingSystem") 1 - n
outputFormat object (type: "https://openminds.ebrains.eu/core/ContentType") 0 - 1
programmingLanguage object (type: "https://openminds.ebrains.eu/controlledTerms/ProgrammingLanguage") 1 - n
softwareRequirement string (free text) 1 - 1

This schema extends the abstract schema researchProductVersion with required developers. For more details have a look at the raw softwareVersion.schema.tpl.json.
Back to OVERVIEW or top of PRODUCTS.

RESEARCH

https://openminds.ebrains.eu/core/ParameterSetting

property expects count
description string (free text) 1 - 1
name string (free text) 1 - 1
relevantFor object (type: "https://openminds.ebrains.eu/controlledTerms/Technique"|"https://openminds.ebrains.eu/controlledTerms/BehavioralTask") 1 - 1
value string (free text) or number 1 - 1
unit object (type: "https://openminds.ebrains.eu/controlledTerms/UnitOfMeasurement")) 0 - 1

For more details have a look at the raw parameterSetting.schema.tpl.json.
Back to OVERVIEW or top of RESEARCH.

https://openminds.ebrains.eu/core/Protocol

property expects count
description string (free text) 1 - 1
behavioralTasks object (type: "https://openminds.ebrains.eu/controlledTerms/BehavioralTask") 0 - n
name string (free text) 1 - 1
techniques object (type: "https://openminds.ebrains.eu/controlledTerms/Techniques") 1 - n
studyTarget object (type: "https://openminds.ebrains.eu/controlledTerms/BiologicalSex"|"https://openminds.ebrains.eu/controlledTerms/Disease"|"https://openminds.ebrains.eu/controlledTerms/Genotype"|"https://openminds.ebrains.eu/controlledTerms/Phenotype"|"https://openminds.ebrains.eu/controlledTerms/Species"|"https://openminds.ebrains.eu/controlledTerms/TermSuggestion"|"https://openminds.ebrains.eu/sands/AnatomicalEntity") 1 - n

For more details have a look at the raw protocol.schema.tpl.json.
Back to OVERVIEW or top of RESEARCH.

https://openminds.ebrains.eu/core/ProtocolExecution

property expects count
input object (type: "https://openminds.ebrains.eu/core/SubjectGroupState"|"https://openminds.ebrains.eu/core/SubjectState"|"https://openminds.ebrains.eu/core/TissueSampleCollectionState"|"https://openminds.ebrains.eu/core/TissueSampleState"|"https://openminds.ebrains.eu/core/FileBundle"|"https://openminds.ebrains.eu/core/FileInstance") 1 - n
output object (type: "https://openminds.ebrains.eu/core/SubjectGroupState"|"https://openminds.ebrains.eu/core/SubjectState"|"https://openminds.ebrains.eu/core/TissueSampleCollectionState"|"https://openminds.ebrains.eu/core/TissueSampleState"|"https://openminds.ebrains.eu/core/FileBundle"|"https://openminds.ebrains.eu/core/FileInstance") 1 - n
parameterSettings object (type: "https://openminds.ebrains.eu/core/Protocol") 0 - n
protocol object (type: "https://openminds.ebrains.eu/core/Protocol") 1 - 1
semanticallyAnchoredTo object (type: "https://openminds.ebrains.eu/sands/AnatomicalEntity") 1 - 1
studyTarget object (type: "https://openminds.ebrains.eu/controlledTerms/BiologicalSex"|"https://openminds.ebrains.eu/controlledTerms/Disease"|"https://openminds.ebrains.eu/controlledTerms/Genotype"|"https://openminds.ebrains.eu/controlledTerms/Phenotype"|"https://openminds.ebrains.eu/controlledTerms/Species"|"https://openminds.ebrains.eu/controlledTerms/TermSuggestion"|"https://openminds.ebrains.eu/sands/AnatomicalEntity") 0 - n

For more details have a look at the raw protocolExecution.schema.tpl.json.
Back to OVERVIEW or top of RESEARCH.

https://openminds.ebrains.eu/core/Specimen

property expects count
biologicalSex object (type: "https://openminds.ebrains.eu/controlledTerms/BiologicalSex") 1 - 1
internalIdentifier string (free text) 1 - 1
genotype object (type: "https://openminds.ebrains.eu/controlledTerms/Genotype") 0 - 1
phenotype object (type: "https://openminds.ebrains.eu/controlledTerms/Phenotype") 0 - 1
species object (type: "https://openminds.ebrains.eu/controlledTerms/Species") 1 - 1
strain object (type: "https://openminds.ebrains.eu/controlledTerms/Strain") 0 - 1

For more details have a look at the raw specimen.schema.tpl.json.
Back to OVERVIEW or top of RESEARCH.

https://openminds.ebrains.eu/core/SpecimenSet

property expects count
biologicalSex object (type: "https://openminds.ebrains.eu/controlledTerms/BiologicalSex") 1 - n
internalIdentifier string (free text) 1 - 1
genotype object (type: "https://openminds.ebrains.eu/controlledTerms/Genotype") 0 - n
phenotype object (type: "https://openminds.ebrains.eu/controlledTerms/Phenotype") 0 - n
quantity number (integer) 1 - 1
species object (type: "https://openminds.ebrains.eu/controlledTerms/Species") 1 - n
strain object (type: "https://openminds.ebrains.eu/controlledTerms/Strain") 0 - n

For more details have a look at the raw specimenSet.schema.tpl.json.
Back to OVERVIEW or top of RESEARCH.

https://openminds.ebrains.eu/core/SpecimenState

property expects count
age object (type: "https://openminds.ebrains.eu/core/QuantitativeValue"|"https://openminds.ebrains.eu/core/QuantitativeValueRange") 0 - 1
pathology object (type: "https://openminds.ebrains.eu/controlledTerms/Pathology") 1 - n
weight object (type: "https://openminds.ebrains.eu/core/QuantitativeValue"|"https://openminds.ebrains.eu/core/QuantitativeValueRange") 0 - 1

For more details have a look at the raw specimenState.schema.tpl.json.
Back to OVERVIEW or top of RESEARCH.

https://openminds.ebrains.eu/core/Subject

property expects count
studiedState object (type: "https://openminds.ebrains.eu/core/SubjectState") 1 - n

This schema extends the abstract schema specimen. For more details have a look at the raw subject.schema.tpl.json.
Back to OVERVIEW or top of RESEARCH.

https://openminds.ebrains.eu/core/SubjectGroup

property expects count
studiedState object (type: "https://openminds.ebrains.eu/core/SubjectState") 1 - n

This schema extends the abstract schema specimenSet. For more details have a look at the raw subjectGroup.schema.tpl.json.
Back to OVERVIEW or top of RESEARCH.

https://openminds.ebrains.eu/core/SubjectGroupState

property expects count
ageCategory object (type: "https://openminds.ebrains.eu/controlledTerms/AgeCategory") 1 - n
handedness object (type: "https://openminds.ebrains.eu/controlledTerms/Laterality") 0 - n

This schema extends the abstract schema specimenState. For more details have a look at the raw subjectGroupState.schema.tpl.json.
Back to OVERVIEW or top of RESEARCH.

https://openminds.ebrains.eu/core/SubjectState

property expects count
ageCategory object (type: "https://openminds.ebrains.eu/controlledTerms/AgeCategory") 1 - 1
handedness object (type: "https://openminds.ebrains.eu/controlledTerms/Laterality") 0 - 1

This schema extends the abstract schema specimenState. For more details have a look at the raw subjectState.schema.tpl.json.
Back to OVERVIEW or top of RESEARCH.

https://openminds.ebrains.eu/core/TissueSample

property expects count
laterality object (type: "https://openminds.ebrains.eu/controlledTerms/Laterality") 0 - n
origin object (type: "https://openminds.ebrains.eu/controlledTerms/OrganOfOrigin") 1 - 1
studiedState object (type: "https://openminds.ebrains.eu/core/TissueSampleState") 1 - n
type object (type: "https://openminds.ebrains.eu/controlledTerms/TissueSampleType") 1 - 1

This schema extends the abstract schema specimen. For more details have a look at the raw tissueSample.schema.tpl.json. Back to OVERVIEW or top of RESEARCH.

https://openminds.ebrains.eu/core/TissueSampleCollection

property expects count
laterality object (type: "https://openminds.ebrains.eu/controlledTerms/Laterality") 0 - n
origin object (type: "https://openminds.ebrains.eu/controlledTerms/OrganOfOrigin") 1 - n
studiedState object (type: "https://openminds.ebrains.eu/core/TissueSampleState") 1 - n
type object (type: "https://openminds.ebrains.eu/controlledTerms/TissueSampleType") 1 - n

This schema extends the abstract schema specimenSet. For more details have a look at the raw tissueSampleCollection.schema.tpl.json. Back to OVERVIEW or top of RESEARCH.

https://openminds.ebrains.eu/core/TissueSampleCollectionState

property expects count

This schema extends the abstract schema specimenState. For more details have a look at the raw tissueSampleCollectionState.schema.tpl.json. Back to OVERVIEW or top of RESEARCH.

https://openminds.ebrains.eu/core/TissueSampleState

property expects count

This schema extends the abstract schema specimenState. For more details have a look at the raw tissueSampleState.schema.tpl.json.
Back to OVERVIEW or top of RESEARCH.

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