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deploy-ext-tools.yml
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app: regenerate federation CLI with client active flag #TASK-8350 Push ext-tools for develop branches #584: Commit 6df6cec pushed by j-coll
7s TASK-8350
TASK-8350
7s
storage: add missing javadoc on VariantMongoDBAdaptor.updateAnnotatio… Push ext-tools for develop branches #583: Commit afe7273 pushed by j-coll
10s TASK-8350
TASK-8350
10s
Merge from develop Push ext-tools for develop branches #582: Commit 1a06014 pushed by imedina
31s TASK-8076
TASK-8076
31s
Merge branch 'develop' into TASK-8076 Push ext-tools for develop branches #581: Commit 7d1c0cc pushed by imedina
30s TASK-8076
TASK-8076
30s
analysis: fix custom diplotype annotation being replaced by CPIC anno… Push ext-tools for develop branches #580: Commit 7393bea pushed by imedina
16s TASK-8076
TASK-8076
16s
catalog: add Emedgene HL7 v2 JSON import for ClinicalAnalysis #TASK-8076 Push ext-tools for develop branches #579: Commit 6c191ef pushed by imedina
21s TASK-8076
TASK-8076
21s
analysis: add custom diplotype annotation support to PGx tool #TASK-8076 Push ext-tools for develop branches #578: Commit 861ccd6 pushed by imedina
18s TASK-8076
TASK-8076
18s
Push ext-tools for develop branches Push ext-tools for develop branches #577: by imedina
25s TASK-8076
TASK-8076
25s
analysis: openarray analysis create the samples and individuals if th… Push ext-tools for develop branches #576: Commit ca2f1bc pushed by imedina
18s TASK-8076
TASK-8076
18s
catalog: add samplesheet registration with REST endpoint and tests #T… Push ext-tools for develop branches #575: Commit 776e7b5 pushed by imedina
26s TASK-8076
TASK-8076
26s
analysis: fix CPIC annotator null guidelineid causing 400 errors #TAS… Push ext-tools for develop branches #574: Commit df276d5 pushed by imedina
21s TASK-8076
TASK-8076
21s
analysis: fix summary stats counting for genes and drugs #TASK-8076 Push ext-tools for develop branches #573: Commit a3f4b2d pushed by imedina
21s TASK-8076
TASK-8076
21s
catalog: add analysis field to IndividualMongoDBAdaptor update params… Push ext-tools for develop branches #572: Commit c9611aa pushed by imedina
26s TASK-8076
TASK-8076
26s
core: increase MAXIMUM_LINES_CONTENT from 1000 to 5000 #TASK-8076 Push ext-tools for develop branches #571: Commit d31ba0e pushed by imedina
21s TASK-8076
TASK-8076
21s
analysis: fix executor to run Python CLI locally instead of Docker #T… Push ext-tools for develop branches #570: Commit 0c6f311 pushed by imedina
23s TASK-8076
TASK-8076
23s
docker: install uv in opencga-base and fix executor Python CLI path #… Push ext-tools for develop branches #569: Commit 86db25d pushed by imedina
22s TASK-8076
TASK-8076
22s
core: reorder params and rename compareTo to compareToFile #TASK-8076 Push ext-tools for develop branches #568: Commit f669dc7 pushed by imedina
21s TASK-8076
TASK-8076
21s
analysis: handle ambiguous diplotypes and improve comparison matching… Push ext-tools for develop branches #567: Commit 7938c8d pushed by imedina
23s TASK-8076
TASK-8076
23s
analysis: update Individual catalog with PGx summary after executor c… Push ext-tools for develop branches #566: Commit 6fb1a39 pushed by imedina
23s TASK-8076
TASK-8076
23s
clients: new individual analaysis object Push ext-tools for develop branches #565: Commit b7f0390 pushed by imedina
22s TASK-8076
TASK-8076
22s
catalog: add pharmacogenomics analysis field to Individual entity #TA… Push ext-tools for develop branches #564: Commit 6e4c511 pushed by imedina
22s TASK-8076
TASK-8076
22s
clients: new pgx analysis updated Push ext-tools for develop branches #563: Commit f28ca2d pushed by imedina
23s TASK-8076
TASK-8076
23s
analysis: add CPIC allele location models to Python pharmacogenomics … Push ext-tools for develop branches #562: Commit d3d26c3 pushed by imedina
27s TASK-8076
TASK-8076
27s
analysis: improve CPIC annotation by adding the allele_location_value… Push ext-tools for develop branches #561: Commit 8a3d780 pushed by jtarraga
26s TASK-8076
TASK-8076
26s
analysis: enhance allele typing and CPIC annotation handling Push ext-tools for develop branches #560: Commit 4797a79 pushed by imedina
22s TASK-8076
TASK-8076
22s