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issue with converting models to sbml (sbml2model function)

bug

Status: Open.

#63 In opencobra/MASS-Toolbox;

· martamatos opened on Feb 11, 2016

getODE fails with volumes in customODEs

bug

Status: Open.

#57 In opencobra/MASS-Toolbox;

· avsastry opened on Jun 19, 2015

Models only store default units

Status: Open.

#46 In opencobra/MASS-Toolbox;

· avsastry opened on Jan 29, 2015

adjustUnits issue colliding with Ignore option in Model

Status: Open.

#34 In opencobra/MASS-Toolbox;

· phantomas1234 opened on Jan 7, 2015

Support for SBML annotations

Status: Open.

#23 In opencobra/MASS-Toolbox;

· phantomas1234 opened on Mar 17, 2014

 ·  

1.1

getJacobian (and probably some other functions) don't take into account constant metabolites

bug

Status: Open.

#22 In opencobra/MASS-Toolbox;

· phantomas1234 opened on Jan 8, 2014

Unit issue with compartmentless models

bug

Status: Open.

#21 In opencobra/MASS-Toolbox;

· phantomas1234 opened on Jan 6, 2014

adjustUnits should take CustomRateLaws into account

bug

Status: Open.

#20 In opencobra/MASS-Toolbox;

· phantomas1234 opened on Oct 8, 2013

 ·  

1.1

calcPERC aborts when encountering a reaction at equilibrium with a non-zero flux

enhancement

Status: Open.

#16 In opencobra/MASS-Toolbox;

· phantomas1234 opened on May 30, 2013

 ·  

1.0

D-LACt2 vs. D_LACt2

Status: Open.

#15 In opencobra/MASS-Toolbox;

· phantomas1234 opened on May 23, 2013

How to deal with weird stoichiometric factors ...

enhancement

Status: Open.

#14 In opencobra/MASS-Toolbox;

· phantomas1234 opened on May 23, 2013

Genereate 'How to ...' documentation notebooks

enhancement

Status: Open.

#13 In opencobra/MASS-Toolbox;

· phantomas1234 opened on May 22, 2013

 ·  

1.0