Update codecov.yml to use git actions #131
Workflow file for this run
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| name: MATLAB Tests and Code Coverage | |
| on: | |
| pull_request: | |
| branches: | |
| - '**' | |
| jobs: | |
| build: | |
| runs-on: self-hosted | |
| steps: | |
| - name: Checkout PR Code | |
| uses: actions/checkout@v4 | |
| - name: Clone COBRA Toolbox | |
| run: | | |
| git clone -b develop https://github.com/opencobra/cobratoolbox.git cobratoolbox | |
| - name: Run MATLAB Tests | |
| run: | | |
| matlab -batch "run('cobratoolbox/initCobraToolbox.m'); diary('test_results.txt'); run('cobratoolbox/test/testAll.m'); diary off;" | |
| - name: Upload Test Report | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: test-report | |
| path: test_results.txt | |
| # Parse Test Results and Comment on PR | |
| - name: Parse Test Results and Comment on PR | |
| uses: actions/github-script@v5 | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| with: | |
| script: | | |
| const fs = require('fs'); | |
| const xml2js = require('xml2js'); | |
| const parser = new xml2js.Parser({ explicitArray: true }); | |
| const xml = fs.readFileSync('CodeCovTestResults.xml', 'utf8'); | |
| parser.parseString(xml, function (err, result) { | |
| if (err) { | |
| console.error('Failed to parse XML:', err); | |
| return; | |
| } | |
| const testSuite = result.testsuites.testsuite[0]; | |
| const summary = `Test Results: Passed: ${testSuite.$.tests - testSuite.$.failures - testSuite.$.skipped}, Failed: ${testSuite.$.failures}, Skipped: ${testSuite.$.skipped}`; | |
| let details = ''; | |
| if (testSuite.$.failures > 0) { | |
| details = '\n\nFailed Tests:\n'; | |
| testSuite.testcase.forEach(test => { | |
| if (test.error) { | |
| details += `* ${test.$.name}: ${test.error[0].$.message}\n`; | |
| } | |
| }); | |
| } | |
| github.rest.issues.createComment({ | |
| issue_number: context.issue.number, | |
| owner: context.repo.owner, | |
| repo: context.repo.repo, | |
| body: summary + details | |
| }); | |
| }); |