Add devcontainer for use in codespaces

.devcontainer/Dockerfile

@@ -0,0 +1,19 @@
+FROM continuumio/miniconda3
+
+# Set the working directory
+#WORKDIR /workspace
+
+# Install Python
+RUN conda install python -y
+
+# Copy the project files
+# COPY . .
+
+# Install the necessary packages
+RUN pip install .
+
+# Clean up
+RUN conda clean -afy
+
+# Set the default command
+CMD ["bash"]

.devcontainer/devcontainer.json

@@ -0,0 +1,7 @@
+{
+  "name": "AEOLIS Development Container",
+  "build": {
+    "dockerfile": "Dockerfile",
+    "context": ".."
+  }
+}

aeolis/vegetation.py

@@ -28,23 +28,13 @@
 import logging
 from scipy import ndimage, misc
 import numpy as np
-import math
-#import matplotlib.pyplot as plt
 from aeolis.wind import *
 import aeolis.rotation
 
 # package modules
 import aeolis.wind
-#from aeolis.utils import *
 
 import numpy as np
-from scipy.integrate import quad
-from scipy.integrate import romberg
-from scipy.optimize import root_scalar
-from scipy.signal import convolve
-from scipy.special import sici
-from scipy.special import erfi
-import matplotlib.pyplot as plt
 
 # initialize logger
 logger = logging.getLogger(__name__)

aeolis/wind.py

@@ -28,18 +28,9 @@
 
 import numpy as np
 import logging
-import operator
-#import scipy.special
-#import scipy.interpolate
-from scipy import ndimage, misc
-import matplotlib.pyplot as plt
-from scipy.integrate import quad
-from scipy.integrate import romberg
+
+from scipy import ndimage
 from scipy.optimize import root_scalar
-from scipy.signal import convolve
-from scipy.special import sici
-from scipy.special import erfi
-from scipy.interpolate import griddata
 
 
 # package modules

pyproject.toml

@@ -31,7 +31,7 @@ dependencies = [
   "bmi-python",
   "netCDF4",
   "scipy",
-  "numpy<1.24,>=1.18",
+  "numpy",
   "matplotlib",
   "numba",
 ]