add cosmx ingestion

[jakubmajercik]

No description provided.

[dorien-er]

Reports look good to me, but having issues running it after updating OP to v4.0 and siqc to v0.2. An HTML file is being generated, but it looks empty.

Fine to merge when this is resolved

[dorien-er]

Can you still surface the parameters that define which graphs should be included in the CosMx report at the workflow level, so users can always toggle on/off any graph they want?

--obs_area: default Area
--obs_aspect_ratio: default AspectRatio
--obs_dapi_stain: default Mean.DAPI, multiple true
--obs_membrane_stain: default Mean.MembraneStain, multiple true
--obs_panck_stain: None (no default), multiple True
--obs_cd45_stain: None (no default), multiple True
--obs_cd3_stain: None (no default), multiple True

[dorien-er]

LGTM!