All

9 repositories

tsne
Public
A python wrapper for Barnes-Hut tsne
Python
•
Other
•132•0•0•2•Updated Sep 18, 2025Sep 18, 2025
pyotf
Public
python functions for simulating optical transfer functions
Python
•
Apache License 2.0
•19•0•0•0•Updated Mar 28, 2023Mar 28, 2023
dphtools
Public
Tools for optics and image analysis
Python
•
Apache License 2.0
•1•0•0•0•Updated Oct 17, 2022Oct 17, 2022
peaks
Public
A package of utilities for finding, fitting and analyzing punctate image data.
Python
•
Apache License 2.0
•3•0•0•0•Updated Sep 9, 2022Sep 9, 2022
awesome-single-cell
Public
List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.
MIT License
•1.1k•3•0•0•Updated Apr 12, 2022Apr 12, 2022
fbpca
Public archive
Fast Randomized PCA/SVD
Python
•
Other
•91•0•0•0•Updated Jan 30, 2020Jan 30, 2020
umap
Public
Uniform Manifold Approximation and Projection
Python
•
BSD 3-Clause "New" or "Revised" License
•864•0•0•0•Updated Jun 10, 2019Jun 10, 2019
scrublet
Public
Detect doublets in single-cell RNA-seq data
Jupyter Notebook
•
MIT License
•80•0•0•0•Updated Oct 5, 2018Oct 5, 2018
vcflib
Public
a simple C++ library for parsing and manipulating VCF files, + many command-line utilities
C++
•
MIT License
•222•0•0•0•Updated Jun 6, 2017Jun 6, 2017

ProTip! When viewing an organization's repositories, you can use the props. filter to filter by custom property.