Skip to content

@Andre-lab Andre-lab

Change the repository type filter

All

    Repositories list

    25 repositories

    • stability_assay_paper

      Public
      0•0•0•0•Updated Feb 11, 2026Feb 11, 2026

    • mutsel-rate-manuscript

      Public
      Python
      •0•1•0•0•Updated Sep 3, 2025Sep 3, 2025

    • evodock

      Public
      A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
      Python
      •8•29•4•0•Updated Jul 5, 2025Jul 5, 2025

    • cloudcontactscore

      Public
      Fast score function for coarse grained protein docking
      Python
      •0•1•0•0•Updated Mar 21, 2025Mar 21, 2025

    • rosetta

      Public
      The Rosetta Bio-macromolecule modeling package.
      C++
      •
      Other
      •149•0•0•0•Updated Mar 8, 2025Mar 8, 2025

    • symmetryhandler

      Public
      Simple utility library to deal with symmetry files in Rosetta and visualizing them in Rosetta
      Perl
      •0•0•0•0•Updated Feb 27, 2025Feb 27, 2025

    • cubicsym

      Public
      Tools for using cubic symmetry with Rosetta
      Python
      •1•2•0•0•Updated Feb 27, 2025Feb 27, 2025

    • zernike_ligand

      Public
      HTML
      •1•0•0•0•Updated Jan 22, 2025Jan 22, 2025

    • site-rate-averaging

      Public
      Python
      •0•0•0•0•Updated May 7, 2024May 7, 2024

    • RosettaEvolve

      Public
      Python
      •0•4•0•0•Updated Apr 29, 2024Apr 29, 2024

    • vera-masters

      Public
      Code used in Vera Karlin's master thesis project
      Jupyter Notebook
      •0•0•0•0•Updated Feb 6, 2024Feb 6, 2024

    • af_cubic_docking

      Public
      0•1•0•0•Updated Jun 29, 2023Jun 29, 2023

    • DnaK_paper

      Public
      0•0•0•0•Updated Jun 10, 2022Jun 10, 2022

    • DnaK_response_manuscript

      Public
      0•0•0•0•Updated Oct 20, 2021Oct 20, 2021

    • ZEAL_web

      Public
      ZEAL version 2 optimized for web server deployment
      JavaScript
      •2•2•0•0•Updated Apr 20, 2021Apr 20, 2021

    • ZEAL

      Public
      Software to perform shape-based protein structure alignment.
      4•8•0•0•Updated Mar 25, 2021Mar 25, 2021

    • ZEAL_v1

      Public
      ZErnike-based protein shape ALignment
      JavaScript
      •1•4•0•0•Updated Mar 2, 2021Mar 2, 2021

    • ZEAL_commandLine

      Public
      Command-line interface for ZEAL
      structural-biologyprotein-structurestructural-bioinformaticszernike-polynomials3d-shape-matching3d-zernikezernike-canterakismolecular-shape
      MATLAB
      •2•4•2•0•Updated Feb 22, 2021Feb 22, 2021

    • bioce_webserver

      Public
      Webserver for bioce
      Python
      •
      Other
      •1•0•11•0•Updated Jan 11, 2021Jan 11, 2021

    • coronoscopy

      Public
      GNU General Public License v3.0
      •2•0•0•0•Updated Dec 4, 2020Dec 4, 2020

    • TMS

      Public
      Jupyter Notebook
      •0•2•0•0•Updated Dec 1, 2020Dec 1, 2020

    • bioce

      Public
      bayesian inference of conformational ensembles
      Python
      •
      GNU General Public License v3.0
      •1•1•0•0•Updated Sep 4, 2020Sep 4, 2020

    • hbv_trSAXS

      Public
      Data set and models from analyzing time-resolved SAXS data of Hepatitis B virus
      0•0•0•0•Updated Aug 27, 2020Aug 27, 2020

    • python_training

      Public
      Jupyter Notebook
      •2•0•0•0•Updated Feb 11, 2020Feb 11, 2020

    • sas_tools

      Public
      Simple SAXS/SANS utilities for processing data and visualisation
      Python
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Dec 18, 2018Dec 18, 2018