Repositories list

• SenologieOnFHIR

  Public
  GLSL

  •00 forks•00 stars•00 issues•11 pull request•Updated May 7, 2026May 7, 2026

• BreastCancerSpec

  Public
  HTML

  •00 forks•00 stars•2929 issues•00 pull requests•Updated May 6, 2026May 6, 2026

• fhir-sdc-questionnaire-service

  Public
  A repository implementing the form manager CPS of the FHIR SDC Spec. Reference implementation for national questionnaire catalogue architectures

  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 5, 2026May 5, 2026

• T-CABS

  Public
  GLSL

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 5, 2026May 5, 2026

• TherapiezieleOnkologie

  Public
  Batchfile

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 4, 2026May 4, 2026

• mtb-onkoprint

  Public
  Python

  •

  MIT License

  •00 forks•11 star•00 issues•00 pull requests•Updated Apr 28, 2026Apr 28, 2026

• zotero-comfort

  Public
  Comfort layer for Zotero MCP integration with high-level research workflows

  Python

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 15, 2026Apr 15, 2026

• MVGenomSeq-on-FHIR

  Public
  A repository outlining how to fill the Datenkranz of Modellvorhaben Genomsequenzierung

  GLSL

  •00 forks•11 star•00 issues•00 pull requests•Updated Mar 31, 2026Mar 31, 2026

• rarelink

  Public
  RareLink - A REDCap-based framework linking international registries to FHIR and Phenopackets

  interoperabilityfhirredcap+ 2

  interoperabilityfhirredcapphenopackets-v2rarediseases

  HTML

  •

  Other

  •33 forks•99 stars•3333 issues•00 pull requests•Updated Mar 29, 2026Mar 29, 2026

• rd-cdm

  Public
  Repo for the ontology-based rare disease common data model harmonising international registries, FHIR, and Phenopackets

  genomicsinteroperabilityfhir+ 3

  genomicsinteroperabilityfhirregistriesphenopackets-v2rarediseases

  Python

  •

  MIT License

  •00 forks•88 stars•33 issues•00 pull requests•Updated Mar 25, 2026Mar 25, 2026

• ProstateCancerSpec

  Public
  A specification for prostate carcinomas

  HTML

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 24, 2026Mar 24, 2026

• bih-fhir-ig-template

  Public template
  BIH FHIR Implementation Guide Template with corporate design and CI/CD pipeline

  HTML

  •

  Other

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 18, 2026Mar 18, 2026

• ceir-os-ig

  Public
  CEIR-OS FHIR Implementation Guide - Bedienungsanleitung

  GLSL

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 16, 2026Mar 16, 2026

• fhir-spec-mcp

  Public
  MCP server for navigating FHIR R4 StructureDefinitions

  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 18, 2026Feb 18, 2026

• Semantic_Similarity_SNOMED

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Oct 31, 2025Oct 31, 2025

• .github

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Oct 29, 2025Oct 29, 2025

• LLM_on_SNOMED

  Public
  State-of-the-art Large Language Models (LLMs) for mapping clinical terms to SNOMED CT concepts

  Jupyter Notebook

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 24, 2025Sep 24, 2025

• irud_keio

  Public
  Python

  •

  Other

  •00 forks•22 stars•55 issues•00 pull requests•Updated Jun 26, 2025Jun 26, 2025

• UTN

  Public
  HTML

  •00 forks•11 star•00 issues•00 pull requests•Updated Jun 18, 2025Jun 18, 2025

• nfdi4health-metadataschema

  Public
  GLSL

  •00 forks•22 stars•00 issues•00 pull requests•Updated Jun 11, 2025Jun 11, 2025

• CRISP

  Public
  HTML

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 6, 2025Feb 6, 2025

• ERKER2Phenopackets

  Public
  A pipeline of ERKER data into the phenopackets data structure.

  pipelinerare-diseasesphenopackets-v2

  pipelinerare-diseasesphenopackets-v2

  Python

  •

  MIT License

  •00 forks•44 stars•99 issues•00 pull requests•Updated Jan 28, 2025Jan 28, 2025

• DIMIS

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Dec 4, 2024Dec 4, 2024

• phenopacket_mapper

  Public
  A Python library to map from any bespoke tabular data format to the GA4GH Phenopacket schema.

  parsingmappingcreation+ 1

  parsingmappingcreationphenopackets

  Python

  •

  MIT License

  •00 forks•11 star•2424 issues•00 pull requests•Updated Oct 18, 2024Oct 18, 2024

• ERKER

  Public
  ERKER - ERDRI-CDS kompatible Erfassung in REDCap

  Jupyter Notebook

  •00 forks•22 stars•1212 issues•00 pull requests•Updated Sep 18, 2024Sep 18, 2024

• genophenocorr

  Public
  Genotype Phenotype Correlation

  Jupyter Notebook

  •

  MIT License

  •11 fork•00 stars•00 issues•00 pull requests•Updated Sep 12, 2024Sep 12, 2024

• pyphetools

  Public
  Python Phenopacket Tools

  Python

  •

  MIT License

  •11 fork•00 stars•00 issues•00 pull requests•Updated Jun 5, 2024Jun 5, 2024

• interagent

  Public
  FHIR IG for Interagent

  GLSL

  •

  Creative Commons Zero v1.0 Universal

  •00 forks•11 star•00 issues•00 pull requests•Updated May 7, 2024May 7, 2024

• napkon-string-matching

  Public
  Python

  •00 forks•22 stars•00 issues•00 pull requests•Updated May 26, 2023May 26, 2023

• elimu-vcf2fhir

  Public
  vcf2fhir: a utility to convert VCF files into HL7 FHIR format for genomics-EHR integration

  Python

  •

  Apache License 2.0

  •2424 forks•00 stars•00 issues•00 pull requests•Updated Apr 3, 2023Apr 3, 2023