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    117 repositories

    • MLM4HG

      Public
      This repository is the official implementation of MLM4HG: Masked Language Models are Good Heterogeneous Graph Generalizers.
      Python
      •
      Apache License 2.0
      •0•1•1•0•Updated Dec 20, 2025Dec 20, 2025

    • MEANT

      Public
      Full-Atom Protein-Protein Interaction Prediction via Atomic Equivariant Attention Network
      Python
      •0•0•0•0•Updated Dec 18, 2025Dec 18, 2025

    • C2Cite

      Public
      [WSDM26] C^2-Cite: Contextual-Aware Citation Generation for Attributed Large Language Models
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Dec 18, 2025Dec 18, 2025

    • PathRAG

      Public
      Python
      •78•310•11•5•Updated Dec 17, 2025Dec 17, 2025

    • M3Dphormer

      Public
      Python
      •0•0•0•0•Updated Nov 20, 2025Nov 20, 2025

    • DGP

      Public
      Python
      •0•2•0•0•Updated Nov 4, 2025Nov 4, 2025

    • OpenHGNN

      Public
      This is an open-source toolkit for Heterogeneous Graph Neural Network(OpenHGNN) based on DGL.
      pytorchheterogeneousgraph-neural-networksdgl
      Python
      •
      Apache License 2.0
      •158•951•9•9•Updated Sep 22, 2025Sep 22, 2025

    • GFMPapers

      Public
      Must-read papers on graph foundation models (GFMs)
      MIT License
      •29•355•0•0•Updated Aug 24, 2025Aug 24, 2025

    • GraphLAMA

      Public
      GraphLAMA: Enabling Efficient Adaptation of Graph Language Models with Limited Annotations
      Python
      •
      Apache License 2.0
      •3•3•0•0•Updated Aug 15, 2025Aug 15, 2025

    • CORONA

      Public
      Official code for “CORONA: A Coarse-to-Fine Framework for Graph-based Recommendation with Large Language Models”, accepted by SIGIR 2025
      Python
      •1•6•0•0•Updated Aug 15, 2025Aug 15, 2025

    • GammaGL

      Public
      A multi-backend graph learning library.
      deep-learninggraphtensorflowpytorchframework-agnosticpaddlepaddlemindsporetensorlayerx
      Python
      •
      Apache License 2.0
      •88•241•0•15•Updated Jul 30, 2025Jul 30, 2025

    • FLAG

      Public
      Python
      •0•3•1•0•Updated Jun 4, 2025Jun 4, 2025

    • ggfm

      Public
      Pipeline for Graph Foundation Model
      Python
      •
      Apache License 2.0
      •7•6•1•2•Updated May 26, 2025May 26, 2025

    • FineMolTex

      Public
      Official code of Advancing Molecular Graph-Text Pre-training via Fine-grained Alignment
      Python
      •
      Other
      •1•0•0•0•Updated May 24, 2025May 24, 2025

    • MoseDTI

      Public
      The official implementation of AAAI25 paper "Blend the Separated: Mixture of Synergistic Experts for Data-Scarcity Drug-Target Interaction Prediction"
      Python
      •
      GNU General Public License v3.0
      •2•9•0•0•Updated Apr 29, 2025Apr 29, 2025

    • GraphPAR

      Public
      A PyTorch implementation of "Endowing Pre-trained Graph Models with Provable Fairness" (WWW 2024)
      Python
      •2•4•0•0•Updated Apr 26, 2025Apr 26, 2025

    • LLM4RGNN

      Public
      A PyTorch implementation of "Can Large Language Models Improve the Adversarial Robustness of Graph Neural Networks?" (KDD 2025)
      Python
      •8•1•0•0•Updated Apr 6, 2025Apr 6, 2025

    • GraphTeam

      Public
      Official Repository of "GraphTeam: Facilitating Large Language Model-based Graph Analysis via Multi-Agent Collaboration".
      Python
      •
      MIT License
      •0•42•1•0•Updated Mar 28, 2025Mar 28, 2025

    • GraphMachineLearning--Examples

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Feb 27, 2025Feb 27, 2025

    • ProGraph

      Public
      Official Repository of "Can Large Language Models Analyze Graphs like Professionals? A Benchmark, Datasets and Models". NeurIPS 2024
      Python
      •2•32•0•0•Updated Feb 20, 2025Feb 20, 2025

    • WideGate

      Public
      0•0•0•0•Updated Jan 15, 2025Jan 15, 2025

    • FedGC

      Public
      Implementation of "Federated Graph Condensation with Information Bottleneck Principles" accepted in AAAI 2025
      Python
      •
      MIT License
      •1•5•1•0•Updated Jan 12, 2025Jan 12, 2025

    • Spattack

      Public
      A PyTorch implementation of "Rethinking Byzantine Robustness in Federated Recommendation from Sparse Aggregation Perspective" (AAAI 2025)
      Python
      •1•2•0•0•Updated Jan 8, 2025Jan 8, 2025

    • LMCH

      Public
      The source code of Harnessing Language Model for Cross-Heterogeneity Graph Knowledge Transfer.
      Python
      •0•1•0•0•Updated Dec 29, 2024Dec 29, 2024

    • TAN

      Public
      source code of CIKM 2021 paper "Neural Information Diffusion Prediction withTopic-Aware Attention Network"
      Python
      •6•6•4•0•Updated Dec 16, 2024Dec 16, 2024

    • PolarGate

      Public
      Python
      •2•14•2•0•Updated Oct 8, 2024Oct 8, 2024

    • FatraGNN

      Public
      Python
      •
      MIT License
      •1•1•0•0•Updated Sep 23, 2024Sep 23, 2024

    • FairSIN

      Public
      Code for paper FairSIN: Achieving Fairness in Graph Neural Networks through Sensitive Information Neutralization
      Python
      •1•4•0•0•Updated Aug 16, 2024Aug 16, 2024

    • CusGNN

      Public
      Python
      •0•2•1•0•Updated Aug 14, 2024Aug 14, 2024

    • PHGT

      Public
      Python
      •1•6•0•0•Updated Jul 16, 2024Jul 16, 2024