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    13 repositories

    • course_expression_proteomics

      Public
      Repo for the Cambridge Centre for Proteomics, University of Cambridge, "Expression Proteomics Course"
      Lua
      •
      Other
      •5•3•14•2•Updated Feb 6, 2026Feb 6, 2026

    • adipocyteLOPIT2025

      Public
      Code for 3T3L1 adipocyte LOPIT
      HTML
      •
      Other
      •0•1•0•0•Updated Jun 18, 2025Jun 18, 2025

    • f1000_subcellular_proteomics

      Public
      TeX
      •
      Artistic License 2.0
      •0•0•0•0•Updated Jun 17, 2025Jun 17, 2025

    • f1000_expression_proteomics

      Public
      Github repo for the F1000 paper "A Bioconductor workflow for processing, evaluating, and interpreting expression proteomics data"
      TeX
      •
      Creative Commons Zero v1.0 Universal
      •1•1•2•0•Updated Sep 13, 2024Sep 13, 2024

    • camprotR

      Public
      R
      •
      MIT License
      •0•6•13•0•Updated Jul 1, 2024Jul 1, 2024

    • LoRNA_UPR

      Public
      A LoRNA/LOPIT experiment to explore the relocalisation of RNA and protein in response to the activation of the Unfolded Protein Response (UPR)
      HTML
      •
      MIT License
      •1•1•1•0•Updated Sep 25, 2023Sep 25, 2023

    • pRoloc.novelty

      Public
      A unifying bioinformatics framework for organelle proteomics
      R
      •13•0•0•0•Updated Jun 15, 2023Jun 15, 2023

    • notch

      Public
      Analysis of a benchmark human:yeast dataset to examine the notch in TMT intensities
      HTML
      •0•0•0•0•Updated May 12, 2022May 12, 2022

    • thp-lopit-2021

      Public
      Vignette to accompany Mulvey & Breckels (2021) Spatiotemporal proteomic profiling in THP-1 cells
      HTML
      •1•0•0•0•Updated May 6, 2022May 6, 2022

    • succinyl_LOPIT_for_publication

      Public
      Succinylation LOPIT data for Kafkia et al 2022
      HTML
      •
      MIT License
      •0•0•0•0•Updated Mar 26, 2022Mar 26, 2022

    • succinyl_LOPIT

      Public
      HTML
      •
      MIT License
      •0•0•0•0•Updated Mar 26, 2022Mar 26, 2022

    • proteomicsPractical

      Public
      HTML
      •0•2•0•1•Updated Oct 18, 2021Oct 18, 2021

    • Visualising_expected_OOPS_data

      Public
      Examples of how to visualise OOPS data
      HTML
      •0•0•0•0•Updated Mar 25, 2020Mar 25, 2020