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@DiseaseOntology Disease Ontology

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    10 repositories

    • HumanDiseaseOntology

      Public
      Repository for the Human Disease Ontology.
      ontologydiseaseobofoundry
      ontologydiseaseobofoundry
      Makefile
      •
      Creative Commons Zero v1.0 Universal
      •117•395•82•1•Updated Apr 22, 2026Apr 22, 2026

    • DO.utils

      Public
      R package for improvement and analysis of the Human Disease Ontology (DO), including semi-automated use assessment from published literature.
      r
      r
      R
      •
      Creative Commons Zero v1.0 Universal
      •0•4•17•6•Updated Apr 10, 2026Apr 10, 2026

    • SPARQLqueries

      Public
      SPARQL queries for the DO-KB SPARQL sandbox and endpoint
      sparqlsparql-querydisease-ontology
      sparqlsparql-querydisease-ontology
      Creative Commons Zero v1.0 Universal
      •0•1•0•0•Updated Apr 7, 2026Apr 7, 2026

    • DiseaseDriversOntology

      Public
      Ontology for drivers and triggers of human diseases, built to classify ExO ontology exposure stressors. An application ontology. Built in collaboration with Env…
      ontologydiseaseobofoundry
      ontologydiseaseobofoundry
      Python
      •
      Creative Commons Zero v1.0 Universal
      •0•4•2•0•Updated Mar 31, 2026Mar 31, 2026

    • PathogenTransmissionOntology

      Public
      The Pathogen Transmission Ontology describes the transmission methods of human disease pathogens from one host, reservoir, or source to another host. The pathog…
      pathogenontologydisease
      pathogenontologydiseaseobofoundrypathogen-transmission-ontology
      Makefile
      •
      Creative Commons Zero v1.0 Universal
      •3•8•3•0•Updated Mar 13, 2026Mar 13, 2026

    • DO_translation_es

      Public
      Minimal code to support translation of the Human Disease Ontology into Spanish.
      R
      •
      Creative Commons Zero v1.0 Universal
      •0•0•0•0•Updated Feb 20, 2026Feb 20, 2026

    • SymptomOntology

      Public
      The symptom ontology was designed around the guiding concept of a symptom being: “A perceived change in function, sensation or appearance reported by a patient …
      ontologydiseasesign
      ontologydiseasesignobofoundrysymptom
      Web Ontology Language
      •
      Creative Commons Zero v1.0 Universal
      •16•46•6•0•Updated Feb 3, 2026Feb 3, 2026

    • OWLFlattener

      Public
      OWL Utility to flatten the hierarchical axioms down from ancestors to children
      Java
      •
      Creative Commons Zero v1.0 Universal
      •0•1•0•0•Updated Sep 13, 2023Sep 13, 2023

    • assessing_DO_use

      Public
      The code, data, and figures used or produced in the case study with the Human Disease Ontology for "Assessing Resource Use: A Case Study with the Human Disease …
      R
      •
      Creative Commons Zero v1.0 Universal
      •0•0•2•0•Updated Apr 18, 2023Apr 18, 2023

    • ANMODS

      Public
      Animal Models of Human Diseases
      Creative Commons Zero v1.0 Universal
      •0•0•0•0•Updated Sep 24, 2021Sep 24, 2021
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