Repositories list

• PRONTO

  Public
  rePort geneRator fOr iNpred Tumor bOards

  Python

  •

  GNU General Public License v3.0

  •4•0•17•0•Updated Dec 11, 2025Dec 11, 2025

• tso500_nxf_workflow

  Public
  Nextflow workflow to run Illumina LocalApp and TSOPPI on TSO500 data

  Nextflow

  •

  MIT License

  •1•2•5•3•Updated Nov 14, 2025Nov 14, 2025

• 25-06_bioinfo_ws

  Public
  presentation and resources for NorPreM bioinformatics workshop in June 2025

  4•0•0•0•Updated May 27, 2025May 27, 2025

• 25-06_bioinfo_ws_nextflow

  Public
  codespace template for nextflow workshop

  Dockerfile

  •

  GNU Affero General Public License v3.0

  •15•0•0•0•Updated May 27, 2025May 27, 2025

• 25-06_bioinfo_ws_unit_testing

  Public
  codespace template for unit testing workshop

  Python

  •

  GNU Affero General Public License v3.0

  •15•0•0•0•Updated May 27, 2025May 27, 2025

• TSOPPI_SADET

  Public
  Extraction of data for selected samples from either LocalApp or TSOPPI output directories

  Python

  •

  GNU Affero General Public License v3.0

  •1•0•13•0•Updated Mar 21, 2025Mar 21, 2025

• TSOPPI_documentation

  Public
  Documentation for the TSOPPI images/tools.

  GNU General Public License v3.0

  •0•0•1•0•Updated Mar 17, 2025Mar 17, 2025

• 24-03_bioinfo_ws

  Public
  presentation and resources for NorPreM bioinformatics workshop in March 2024

  13•1•0•0•Updated Jan 27, 2025Jan 27, 2025

• local_app_prepper

  Public
  creates inputs.json files to be used with the LocalApp

  Python

  •

  GNU Affero General Public License v3.0

  •0•0•0•0•Updated Aug 28, 2024Aug 28, 2024

• samplesheet_generator

  Public
  generates samplesheet compatible with the LocalApp

  Python

  •

  MIT License

  •1•0•4•0•Updated Mar 6, 2024Mar 6, 2024