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    63 repositories

    • Thunderbolt.jl

      Public
      A modular shared-memory high-performance framework for multiscale cardiac multiphysics simulations.
      hpcelectrophysiologycardiac-dynamics
      hpcelectrophysiologycardiac-dynamicsfsiscientific-softwaremultiphysics-simulationelectromechanicscomputational-cardiology
      Julia
      •
      MIT License
      •6•26•56•5•Updated Aug 6, 2026Aug 6, 2026

    • MRISequenceBuildingBlocks.jl

      Public
      This package provides efficient pulse-programming patterns for developing MRI pulse sequences that can be exported in the Pulseq format.
      MIT License
      •0•0•0•0•Updated Aug 5, 2026Aug 5, 2026

    • KomaMRI.jl

      Public
      Koma is a GPU-accelerated, Pulseq-compatible framework for simulating Magnetic Resonance Imaging (MRI) acquisitions. The primary focus of this package is to sim…
      simulationmrigpu-acceleration
      simulationmrigpu-accelerationdiffusiondiffusion-mricardiac
      Julia
      •
      MIT License
      •47•215•72•18•Updated Aug 5, 2026Aug 5, 2026

    • MedEye3d.jl

      Public
      Julia library for visualization and annotation medical images, specialized particularly for rapid development segmentation of 3 dimensional images like CT or PE…
      open-sourceopengljulia-language
      open-sourceopengljulia-languagemedical-imagingsegmentationnuclear-medicine
      Jupyter Notebook
      •
      Apache License 2.0
      •2•16•16•1•Updated Aug 5, 2026Aug 5, 2026

    • komamripy

      Public
      Pulseq-compatible, high-performance MRI simulations in Python.
      Python
      •
      MIT License
      •1•8•1•0•Updated Aug 3, 2026Aug 3, 2026

    • MedImages.jl

      Public
      Upstream package that provides an interface to the ITK I/O functions in Julia and a bunch of medical imaging analysis workflows
      TeX
      •
      Apache License 2.0
      •6•9•4•0•Updated Aug 3, 2026Aug 3, 2026

    • NeuroAnalyzer.jl

      Public
      Julia toolbox for analyzing neurophysiological data
      julianeurosciencemeg
      julianeurosciencemegeegpsychologytmsbrainnirsecogtacs
      Julia
      •
      BSD 2-Clause "Simplified" License
      •5•21•1•0•Updated Aug 3, 2026Aug 3, 2026

    • BloodFlowTrixi.jl

      Public
      This package implements 1D and 2D blood flow models for arterial circulation using Trixi.jl, enabling efficient numerical simulation and analysis.
      Julia
      •
      MIT License
      •1•43•2•4•Updated Aug 1, 2026Aug 1, 2026

    • juliahealth.github.io

      Public
      The official JuliaHealth website -- powered by Quarto, made with love.
      blogmachine-learningresearch
      blogmachine-learningresearchjuliahealthmedical-imagingcensusquartoobservational-health
      TeX
      •8•6•11•2•Updated Aug 1, 2026Aug 1, 2026

    • JuliaHealthAudit

      Public
      Reproducible audit of JuliaHealth repositories focusing on documentation, CI and maintenance.
      Julia
      •
      MIT License
      •0•2•0•0•Updated Aug 1, 2026Aug 1, 2026

    • HealthLLM.jl

      Public
      Julia
      •
      MIT License
      •1•3•12•20•Updated Jul 19, 2026Jul 19, 2026

    • HealthDash.jl

      Public
      Julia
      •
      MIT License
      •0•3•1•0•Updated Jul 7, 2026Jul 7, 2026

    • JuliaHealthLLM

      Public
      Prototype JuliaHealth LLM project
      HTML
      •
      MIT License
      •0•5•3•36•Updated Jul 4, 2026Jul 4, 2026

    • Pulseq.jl

      Public
      Pulseq in Julia.
      0•0•0•0•Updated Jun 29, 2026Jun 29, 2026

    • PubChemCrawler.jl

      Public
      Utilities to programmatically query the PubChem database
      xmlrest-apipubchem-database
      xmlrest-apipubchem-database
      Julia
      •
      MIT License
      •8•28•1•2•Updated Jun 26, 2026Jun 26, 2026

    • BlindingIndex.jl

      Public
      Compute James (1996) and Bang (2004) Blinding Indices
      Julia
      •
      BSD 2-Clause "Simplified" License
      •0•0•1•0•Updated Jun 23, 2026Jun 23, 2026

    • IPUMS.jl

      Public
      A convenience package to work with IPUMS data
      Julia
      •
      MIT License
      •3•3•8•5•Updated Jun 22, 2026Jun 22, 2026

    • CloToP.jl

      Public
      Clozapine Toxicity Predictor
      HTML
      •
      BSD 2-Clause "Simplified" License
      •0•1•0•0•Updated Jun 6, 2026Jun 6, 2026

    • JuliaHealthZoo

      Public
      An example zoo of various health research workflows using Julia and JuliaHealth tools.
      Julia
      •
      MIT License
      •0•1•3•0•Updated Apr 8, 2026Apr 8, 2026

    • MedPipe3D.jl

      Public
      Julia
      •
      MIT License
      •4•8•17•1•Updated Mar 19, 2026Mar 19, 2026

    • JuliaHealthEcosystemPaper

      Public
      JuliaCon Proceedings Paper about the JuliaHealth Ecosystem
      TeX
      •
      MIT License
      •1•3•0•0•Updated Mar 9, 2026Mar 9, 2026

    • OMOPCDMFeasibility.jl

      Public
      Feasibility analysis tools for OMOP CDM cohorts in Julia.
      Julia
      •
      MIT License
      •0•5•0•4•Updated Feb 24, 2026Feb 24, 2026

    • OMOPCommonDataModel.jl

      Public
      Pure Julia implementation of the OMOP Common Data Model (CDM)
      juliajulia-languageohdsi
      juliajulia-languageohdsicdmomopcommon-data-model
      Julia
      •
      MIT License
      •3•6•4•2•Updated Feb 5, 2026Feb 5, 2026

    • SMARTBackendServices.jl

      Public
      Server-to-server FHIR connections
      Julia
      •
      MIT License
      •1•0•0•1•Updated Dec 1, 2025Dec 1, 2025

    • HealthSampleData.jl

      Public
      Sample health data for a variety of health formats and use cases
      Julia
      •
      MIT License
      •2•2•7•3•Updated Nov 24, 2025Nov 24, 2025

    • HealthBase.jl

      Public
      Common namespace for functions and interfaces in the JuliaHealth ecosystem
      Julia
      •
      MIT License
      •3•7•1•2•Updated Aug 28, 2025Aug 28, 2025

    • OHDSIAPI.jl

      Public
      A Julia interface to a variety of OHDSI web or API-based services
      JavaScript
      •
      MIT License
      •2•2•0•4•Updated Aug 21, 2025Aug 21, 2025

    • MedEval3D.jl

      Public
      Set of CUDA accelerated medical segmentation metrics.
      medicinecomputer-visionmetrics
      medicinecomputer-visionmetricssegmentation
      Julia
      •
      MIT License
      •4•4•3•3•Updated Aug 2, 2025Aug 2, 2025

    • GitHubAnalytics.jl

      Public
      Analyze various packages under a Github organization by generating visualizations.
      Julia
      •
      MIT License
      •0•2•1•0•Updated May 27, 2025May 27, 2025

    • ITKIOWrapper.jl

      Public
      ITKIOWrapper.jl provides wrapper functions in Julia from the InsightToolkit Image Registration functions.
      Julia
      •
      MIT License
      •0•1•2•0•Updated May 26, 2025May 26, 2025
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