Repositories list

• 2016664

  Public
  Dendritic action potentials and computation in human layer 2/3 cortical neurons with modulated input (Kořenek et al., 2025)

  neuron-simulator

  NMODL

  •0•0•0•0•Updated Apr 24, 2025Apr 24, 2025

• 2018004

  Public
  Dorsal root ganglion (DRG) sensory pseudounipolar neuron and axon model (Farooqui et al., 2024)

  neuron-simulator

  Python

  •0•0•0•0•Updated Apr 18, 2025Apr 18, 2025

• 2016671

  Public
  STSimM: a new tool for evaluating neuron model performance and detecting spike trains similarity (Marasco et al., 2024)

  Python

  •0•0•0•0•Updated Apr 18, 2025Apr 18, 2025

• 2018259

  Public
  Octopus neuron (Kreeger et al., 2025)

  neuron-simulator

  NMODL

  •0•0•0•0•Updated Apr 11, 2025Apr 11, 2025

• 2019444

  Public
  SCN1A variants of uncertain significance (Knox et al, 2025)

  neuron-simulator

  Python

  •0•0•0•0•Updated Apr 11, 2025Apr 11, 2025

• 232097

  Public
  2D model of olfactory bulb gamma oscillations (Li and Cleland 2017)

  olfactionneuron-simulatorolfactory-bulb-main-mitral-glu-cell-olfactory-bulb

  NMODL

  •2•0•0•1•Updated Apr 6, 2025Apr 6, 2025

• 2019342

  Public
  Differential roles of NaV1.2 and NaV1.6 in neocortical pyramidal cell excitability (Garcia et al. 2025)

  neuron-simulator

  AGS Script

  •

  Other

  •0•0•0•0•Updated Apr 1, 2025Apr 1, 2025

• 2018263

  Public
  Network models of single compartment neurons for investigating downmodulation of voltage-gated potassium channels (Ho et al., 2025)

  neuron-simulator

  Python

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Apr 1, 2025Apr 1, 2025

• 267752

  Public
  Intrinsic motivation in cognitive architecture (Nagashima et al., 2024)

  Jupyter Notebook

  •0•0•0•0•Updated Mar 4, 2025Mar 4, 2025

• 2017402

  Public
  Substantia Nigra Par Compacta (Ortner et al., 2017)

  neuron-simulator

  NMODL

  •0•0•0•0•Updated Mar 4, 2025Mar 4, 2025

• 2018006

  Public
  Synchronization in a realistic model of CA1 hippocampal neurons (Fiasconaro and Migliore, 2024)

  neuron-simulator

  AGS Script

  •0•0•0•0•Updated Mar 4, 2025Mar 4, 2025

• 2018262

  Public
  KV1 Channels Enable Myelinated Axons to Transmit Spikes Reliably without Spiking Ectopically (Abdollahi et al., 2025)

  neuron-simulator

  Python

  •0•0•0•0•Updated Mar 3, 2025Mar 3, 2025

• 2018247

  Public
  Virtual Human Retina: Simulating Neural Signalling, Degeneration, and Responses to Electrical Stimulation (Ly et al 2025)

  neuron-simulator

  NMODL

  •0•1•0•0•Updated Feb 7, 2025Feb 7, 2025

• 2018260

  Public
  L2/3 Dendritic Morphology (Landau et al., 2022)

  neuron-simulator

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •1•0•0•0•Updated Feb 4, 2025Feb 4, 2025

• 2018021

  Public
  Disinhibitory circuit for arousal effects in perceptual decision making tasks (Beerendonk et al., 2024)

  neural-mass-model

  MATLAB

  •1•0•0•0•Updated Dec 5, 2024Dec 5, 2024

• 2016218

  Public
  A model of rodent mechanoreceptors (LTMRs) (Medlock et al., 2024)

  MATLAB

  •1•1•0•0•Updated Oct 21, 2024Oct 21, 2024

• 2018009

  Public
  Synchronization in a realistic model of CA1 pyramidal neurons (Fiasconaro and Migliore 2024)

  neuron-simulator

  AGS Script

  •1•0•0•0•Updated Oct 21, 2024Oct 21, 2024

• 187473

  Public
  A model of the T-junction of a C-fiber sensory neuron (Sundt et al. 2015)

  neuron-simulatordorsal-root-ganglion-drg-cellconduction-failure

  NMODL

  •3•0•0•0•Updated Oct 1, 2024Oct 1, 2024

• 2016658

  Public
  Persistent Interruption in Parvalbumin-Positive Inhibitory Interneurons: Biophysical and Mathematical Mechanisms (Upchurch et al., 2024)

  neuron-simulator

  Python

  •1•0•0•0•Updated Aug 15, 2024Aug 15, 2024

• 182784

  Public
  Functional balanced networks with synaptic plasticity (Sadeh et al, 2015)

  pythonabstract-integrate-and-fire-leaky-neuronsynaptic-plasticity-long-term-synaptic-plasticity-

  Python

  •2•1•0•1•Updated Aug 9, 2024Aug 9, 2024

• 267741

  Public
  Biochemically detailed model of post-synaptic plasticity for computational analyses of schizophrenia (Maki-Marttunen et al. in press)

  neuron-simulator

  Python

  •2•1•0•1•Updated Jul 31, 2024Jul 31, 2024

• 267694

  Public
  Human and mouse Purkinje cell models (Masoli et al., 2024)

  cerebellumneuron-simulatorpurkinje-cell

  AGS Script

  •

  Other

  •2•2•0•1•Updated Jul 18, 2024Jul 18, 2024

• 2014832

  Public
  Data-driven multiscale model of macaque auditory thalamocortical circuits reproduces in vivo dynamics (Dura-Bernal et al., 2023)

  neuron-simulatornetpyne-simulator

  NMODL

  •1•1•1•0•Updated Jul 14, 2024Jul 14, 2024

• 2017143

  Public
  Glutamate spillover and plateau potentials (Trpevski et al., 2023)

  neuron-simulator

  NMODL

  •

  GNU General Public License v3.0

  •1•0•0•0•Updated Jul 11, 2024Jul 11, 2024

• 2017403

  Public
  C.elegans motor and interneurons (Nicoletti at al. 2024)

  neuron-simulator

  Python

  •3•0•0•0•Updated Jul 11, 2024Jul 11, 2024

• 2017405

  Public
  Parkinsonian Motor Network Model during Multivariable Closed-loop DBS (Fleming et al 2023)

  neuron-simulatorpynn-simulator

  Python

  •1•0•1•0•Updated Jul 11, 2024Jul 11, 2024

• 2016138

  Public
  Heterogeneous Purkinje Cell model (Cirtala and De Schutter, 2024)

  neuron-simulator

  NMODL

  •1•0•0•0•Updated Jul 9, 2024Jul 9, 2024

• 2015571

  Public
  Axonal K channel inhibition promotes ectopic burst of hippocampal mossy fiber (Kamiya 2024)

  neuron-simulator

  NMODL

  •1•0•0•0•Updated Jul 9, 2024Jul 9, 2024

• 2014821

  Public
  Myelin dystrophy impairs signal transmission and working memory in a multiscale model of the aging prefrontal cortex (Ibañez, Sengupta et al., 2024)

  neuron-simulator

  Python

  •1•0•0•0•Updated Jun 27, 2024Jun 27, 2024

• 2015954

  Public
  Respiratory control model with brainstem CPG and sensory feedback adapted for COVID-19 associated silent hypoxemia (Diekman et al., 2024)

  MATLAB

  •1•0•0•0•Updated Jun 25, 2024Jun 25, 2024