Repositories list

• 2020501

  Public
  Model of CRH Neurons with GABAergic shield

  MATLAB

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 11, 2026Jun 11, 2026

• 2036151

  Public
  CRHPVN Neural Network Modeling Code (Ichiyama et al., accepted)

  Jupyter Notebook

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 11, 2026Jun 11, 2026

• 2031362

  Public
  Biophysical model of Crustacean Cardiac Ganglion (Dopp et al., 2026)

  neuron-simulator

  neuron-simulator

  HTML

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 10, 2026Jun 10, 2026

• 2031084

  Public
  mGluRIII modulation of proximal and distal inhibition onto CA1-PCs (Petroccione et al. 2026)

  neuron-simulator

  neuron-simulator

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 23, 2026May 23, 2026

• 2031083

  Public
  Threshold Power-Law Recurrent Neural Networks (Nicola 2026)

  MATLAB

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 23, 2026May 23, 2026

• 2018023

  Public
  Tonic GABAergic activity facilitates dendritic calcium signaling (Chiu et al 2026)

  neuron-simulator

  neuron-simulator

  PostScript

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 13, 2026May 13, 2026

• 2020506

  Public
  Presynaptic ATP homeostasis (Maex 2026)

  00 forks•00 stars•00 issues•00 pull requests•Updated May 1, 2026May 1, 2026

• 226396

  Public
  Temporal integration and 1/f power scaling in a circuit model of cerebellar interneurons (Maex and Gutkin 2017)

  GAP

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 1, 2026May 1, 2026

• 2019882

  Public
  Integrate-and-fire network model for deviance detection in the MMN protocols (Eissa et al, 2026)

  neuron-simulator

  neuron-simulator

  AGS Script

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 28, 2026Mar 28, 2026

• 2020507

  Public
  Deciphering the modulatory role of direct pedunculopontine nucleus-cortical circuitry in absence seizure dynamics: A computational study (Bing Hu et al. 2025)

  MATLAB

  •00 forks•00 stars•00 issues•00 pull requests•Updated Dec 4, 2025Dec 4, 2025

• 2019587

  Public
  The accumulation of extracellular K+ as in vivo model of epilepsy in CA1 pyramidal neurons (Carpentieri et al, accepted)

  neuron-simulator

  neuron-simulator

  AGS Script

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 13, 2025Nov 13, 2025

• 267103

  Public
  Look-Up Table Synapse (LUTsyn) models for AMPA and NMDA (Pham et al., 2021)

  multiscaleneuron-simulator

  multiscaleneuron-simulator

  NMODL

  •11 fork•00 stars•00 issues•00 pull requests•Updated Oct 17, 2025Oct 17, 2025

• 183017

  Public
  Noise promotes independent control of gamma oscillations and grid firing (Solanka et al 2015)

  11 fork•00 stars•00 issues•00 pull requests•Updated Oct 17, 2025Oct 17, 2025

• 2017404

  Public
  C elegans olfactory transduction (Nicoletti et al. 2023)

  neuron-simulator

  neuron-simulator

  NMODL

  •00 forks•00 stars•00 issues•00 pull requests•Updated Oct 7, 2025Oct 7, 2025

• 2018014

  Public
  Model of dentate granule cell hyperexcitability in bipolar disorder, and the effects of lithium (Singh et al., 2025)

  neuron-simulator

  neuron-simulator

  Jupyter Notebook

  •11 fork•00 stars•00 issues•11 pull request•Updated Oct 7, 2025Oct 7, 2025

• 2019896

  Public
  Inner retina; pathological retina spontaneous oscillation (Horie et al, 2025)

  neuron-simulator

  neuron-simulator

  NMODL

  •11 fork•00 stars•00 issues•11 pull request•Updated Oct 6, 2025Oct 6, 2025

• 2014826

  Public
  iFGF14 Peptide Derivative Differentially Regulates Nav1.2 and Nav1.6 Function (Arman et al., 2025)

  neuron-simulator

  neuron-simulator

  NMODL

  •00 forks•00 stars•00 issues•00 pull requests•Updated Oct 6, 2025Oct 6, 2025

• 2019891

  Public
  Dopamine modulation of Excitability and STDP in CA1 single neuron (Manara et al., 2025)

  neuron-simulator

  neuron-simulator

  NMODL

  •00 forks•00 stars•00 issues•00 pull requests•Updated Oct 6, 2025Oct 6, 2025

• 2019788

  Public
  Songbird HVC(RA) neuron with mitochondria (Castelfranco and Alcami 2025)

  neuron-simulator

  neuron-simulator

  NMODL

  •00 forks•00 stars•00 issues•00 pull requests•Updated Oct 2, 2025Oct 2, 2025

• 2018020

  Public
  SNc projection specific rebound responses (Stojanovic et al., 2025)

  neuron-simulator

  neuron-simulator

  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 30, 2025Sep 30, 2025

• 2019343

  Public
  Computational Model of Optogenetic Inhibition of CA1 pyramidal neuron (Weyn et al., 2025)

  neuron-simulator

  neuron-simulator

  Jupyter Notebook

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 23, 2025Sep 23, 2025

• 2019877

  Public
  Cerebellar-thalamo-cortical brain network for sensorimotor communication (Romano et al., 2025)

  MATLAB

  •00 forks•00 stars•00 issues•00 pull requests•Updated Sep 22, 2025Sep 22, 2025

• 2019883

  Public
  Biophysical model of L5 Pyramidal Neuron (Headley, Latimer et al., 2025)

  neuron-simulator

  neuron-simulator

  Jupyter Notebook

  •

  MIT License

  •11 fork•00 stars•00 issues•11 pull request•Updated Sep 22, 2025Sep 22, 2025

• 2018628

  Public
  A biochemically detailed model of GABAB-receptor activation for pre- and postsynaptic domains. (Mäki-Marttunen et al., accepted)

  neuron-simulator

  neuron-simulator

  Python

  •00 forks•11 star•00 issues•00 pull requests•Updated Aug 8, 2025Aug 8, 2025

• 2018019

  Public
  Cerebellar stellate cell model (Rizza et al., 2021)

  neuron-simulator

  neuron-simulator

  AGS Script

  •11 fork•00 stars•00 issues•00 pull requests•Updated Jul 21, 2025Jul 21, 2025

• 2018018

  Public
  Cerebellar basket cell model (Masoli et al., 2025)

  neuron-simulator

  neuron-simulator

  AGS Script

  •11 fork•00 stars•00 issues•00 pull requests•Updated Jul 21, 2025Jul 21, 2025

• 2019791

  Public
  ASTRO Fig 5 K⁺ Dynamics in Fully Reconstructed Four CA1 Astrocytes (Savtchenko LP et al., 2018)

  neuron-simulator

  neuron-simulator

  NMODL

  •11 fork•00 stars•00 issues•00 pull requests•Updated Jul 16, 2025Jul 16, 2025

• 154769

  Public
  Mixed mode oscillations as a mechanism for pseudo-plateau bursting (Vo et al. 2010)

  pituitary-cellbursting-oscillations-bifurcationxpp-web-link-to-model

  pituitary-cellbursting-oscillations-bifurcationxpp-web-link-to-model

  11 fork•00 stars•00 issues•00 pull requests•Updated Jul 10, 2025Jul 10, 2025

• 182988

  Public
  TRPM8-dependent dynamic response in cold thermoreceptors (Olivares et al. 2015)

  neuron-simulatorbursting-temporal-pattern-generation-oscillations-dorsal-root-ganglion-drg-cell-dorsal-root-ganglion

  neuron-simulatorbursting-temporal-pattern-generation-oscillations-dorsal-root-ganglion-drg-cell-dorsal-root-ganglion

  Python

  •11 fork•00 stars•00 issues•00 pull requests•Updated Jul 10, 2025Jul 10, 2025

• 182906

  Public
  Neural-field model of generalized seizures (Zhao et al., 2015)

  matlabepilepsy

  matlabepilepsy

  MATLAB

  •11 fork•11 star•00 issues•00 pull requests•Updated Jul 10, 2025Jul 10, 2025