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@Neuroinflab Laboratory of Neuroinformatics, Nencki Institute

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    27 repositories

    • kESI

      Public
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •5•2•12•2•Updated Aug 26, 2026Aug 26, 2026

    • torch-deep-retina

      Public
      PyTorch implementation of Deep Retina
      Jupyter Notebook
      •
      MIT License
      •4•0•0•0•Updated May 14, 2026May 14, 2026

    • Marmoset-EBRAINS

      Public
      Repository hosting code and datasets for the Marmoset@EBRAINS Open Call 4 project
      Python
      •
      MIT License
      •0•0•0•0•Updated Apr 16, 2026Apr 16, 2026

    • siibra-python

      Public
      Software interfaces for interacting with brain atlases - Python client
      Python
      •
      Apache License 2.0
      •12•0•0•0•Updated Feb 23, 2026Feb 23, 2026

    • neuroglancer-scripts

      Public
      Conversion of neuroimaging data for display in Neuroglancer
      Python
      •
      MIT License
      •20•0•0•0•Updated Feb 18, 2026Feb 18, 2026

    • siibra-configurations

      Public
      Python
      •2•0•0•0•Updated Feb 18, 2026Feb 18, 2026

    • openMINDS_instances

      Public
      Well defined metadata instances for selected schemas of the openMINDS metadata models.
      Python
      •
      MIT License
      •18•1•0•0•Updated Jul 31, 2025Jul 31, 2025

    • RyR2RyR3

      Public
      Ryanodine type 2 and 3 receptor models
      TeX
      •
      Creative Commons Attribution 4.0 International
      •1•0•0•0•Updated Jul 31, 2025Jul 31, 2025

    • siibra-explorer

      Public
      TypeScript
      •
      Apache License 2.0
      •6•0•0•0•Updated Jul 29, 2025Jul 29, 2025

    • ng-layer-tune

      Public
      TypeScript
      •
      MIT License
      •2•0•0•0•Updated Mar 21, 2025Mar 21, 2025

    • kCSD-python

      Public
      Kernel Current Source Density
      Jupyter Notebook
      •
      Other
      •24•25•12•3•Updated Jun 26, 2024Jun 26, 2024

    • pyEcoHAB

      Public
      Python
      •
      GNU Lesser General Public License v2.1
      •7•4•0•0•Updated Jul 26, 2023Jul 26, 2023

    • PyMICE

      Public
      PyMICE - a Python™ library for mice behavioural data analysis
      Python
      •
      GNU General Public License v3.0
      •6•7•5•0•Updated Jul 8, 2023Jul 8, 2023

    • lsfm_image_server

      Public
      Python
      •
      GNU General Public License v3.0
      •0•3•0•0•Updated May 18, 2023May 18, 2023

    • fourspheremodel

      Public
      Four sphere head model for computations of EEG potentials
      Python
      •8•6•0•1•Updated Feb 9, 2023Feb 9, 2023

    • Decoding_attention_nets

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Feb 7, 2022Feb 7, 2022

    • stdp_adrenergic_project

      Public
      Python
      •2•1•0•1•Updated Feb 8, 2021Feb 8, 2021

    • analysis.marmosetbrain.org

      Public
      An on-line framework for exploration, visualization, and analysis of the marmoset cerebral cortex structural connectivity.
      JavaScript
      •
      GNU Affero General Public License v3.0
      •2•5•0•0•Updated Sep 8, 2020Sep 8, 2020

    • devops_talk_euroscipy2019

      Public
      Slides from the talk "Scientific DevOps: Designing Reproducible Data Analysis Pipelines with Containerized Workflow Managers" given at EuroScipy 2019 in Bilbao,…
      2•0•0•0•Updated May 1, 2020May 1, 2020

    • marmosetbrain.org

      Public
      JavaScript
      •
      GNU Affero General Public License v3.0
      •0•3•0•0•Updated Sep 18, 2019Sep 18, 2019

    • mne-csd

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •2•0•3•1•Updated Sep 5, 2019Sep 5, 2019

    • Thalamocortical

      Public
      Traub mode + additional module to record transmembrane currents
      Python
      •4•1•0•0•Updated Jul 11, 2019Jul 11, 2019

    • StarWarsIntroCreator

      Public
      Create your own Star Wars intro.
      CSS
      •109•1•0•1•Updated Apr 30, 2019Apr 30, 2019

    • leadfield_maps

      Public
      Python
      •1•0•0•0•Updated Sep 1, 2018Sep 1, 2018

    • PyMICE_SM

      Public
      TeX
      •1•4•0•0•Updated Mar 20, 2018Mar 20, 2018

    • mdplot.marmosetbrain.org

      Public
      MDPLOT parser for the marmosetbrain.org project
      0•0•0•0•Updated Jan 23, 2018Jan 23, 2018

    • BrainSlices

      Public
      JavaScript
      •
      Other
      •0•0•0•0•Updated May 19, 2016May 19, 2016
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