Repositories list

• Natural_motion-model

  Public
  Jupyter Notebook

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Nov 4, 2025Nov 4, 2025

• arborStats

  Public
  A small command-line tool to run a flattening pipeline (e.g., flatone) and/or compute arbor statistics for a list of neuron segment IDs

  Python

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Oct 30, 2025Oct 30, 2025

• flatone

  Public
  A command-line tool to flatten one EyeWire II neuron automatically.

  Python

  •

  GNU General Public License v3.0

  •1•0•0•0•Updated Aug 21, 2025Aug 21, 2025

• Lab_Protocols

  Public
  This repositories contains the lab notes for several procedures at Schwartz lab. It's intended to serve as a set of instructions and checklists of some of the most common experiments in the lab

  0•0•0•0•Updated Jun 25, 2024Jun 25, 2024

• NF1

  Public
  NF1 data, LME results and plotting notebooks to share between labs.

  Jupyter Notebook

  •0•0•0•0•Updated May 8, 2024May 8, 2024

• RGCMorphologyAnalyzer

  Public
  Calculation morphological parameters for neurons - RGCs and amacrines

  MATLAB

  •

  GNU General Public License v3.0

  •0•1•0•0•Updated Jan 29, 2024Jan 29, 2024

• CHAT_surface_finder

  Public
  for finding chat bands in image stack

  MATLAB

  •1•0•0•0•Updated Aug 19, 2023Aug 19, 2023

• rgc-classifier

  Public
  A classification model for mouse retinal ganglion cells

  C++

  •0•1•0•0•Updated May 24, 2022May 24, 2022

• behavior_gui

  Public
  gui for behavior rig, implemented in dart

  Dart

  •0•0•0•0•Updated Aug 17, 2021Aug 17, 2021