Repositories list

• whale-auth-tools

  Public
  MIT License

  •00 forks in ScilifelabDataCentre/whale-auth-tools•00 stars in ScilifelabDataCentre/whale-auth-tools•22 issues in ScilifelabDataCentre/whale-auth-tools•11 pull request in ScilifelabDataCentre/whale-auth-tools•Updated Oct 31, 2026Oct 31, 2026

• open-vox

  Public
  An open source audio and video to text transcription service.

  Python

  •

  MIT License

  •00 forks in ScilifelabDataCentre/open-vox•00 stars in ScilifelabDataCentre/open-vox•11 issue in ScilifelabDataCentre/open-vox•33 pull requests in ScilifelabDataCentre/open-vox•Updated Oct 31, 2026Oct 31, 2026

• openllm-search-gateway

  Public
  Python

  •

  MIT License

  •00 forks in ScilifelabDataCentre/openllm-search-gateway•00 stars in ScilifelabDataCentre/openllm-search-gateway•22 issues in ScilifelabDataCentre/openllm-search-gateway•22 pull requests in ScilifelabDataCentre/openllm-search-gateway•Updated Oct 31, 2026Oct 31, 2026

• scilifelab-ai-agent-mcp-workshop-2026-11-02

  Public
  Workshop: "Developing AI Agents in Life Sciences" by SciLifeLab Data Centre on Monday, 2 November 2026 (10:00 to 15:30). Hands-on sessions at Room Belfragesalen…

  mcpworkshop-materialslife-sciences+ 17

  mcpworkshop-materialslife-sciencesscilifelabai-in-educationai-agentlangchainai-literacyai-integrationai-agents-framework+ 10

  Python

  •

  MIT License

  •00 forks in ScilifelabDataCentre/scilifelab-ai-agent-mcp-workshop-2026-11-02•33 stars in ScilifelabDataCentre/scilifelab-ai-agent-mcp-workshop-2026-11-02•22 issues in ScilifelabDataCentre/scilifelab-ai-agent-mcp-workshop-2026-11-02•33 pull requests in ScilifelabDataCentre/scilifelab-ai-agent-mcp-workshop-2026-11-02•Updated Oct 31, 2026Oct 31, 2026

• kiarva-frontend

  Public
  TypeScript

  •

  MIT License

  •00 forks in ScilifelabDataCentre/kiarva-frontend•11 star in ScilifelabDataCentre/kiarva-frontend•00 issues in ScilifelabDataCentre/kiarva-frontend•1313 pull requests in ScilifelabDataCentre/kiarva-frontend•Updated Oct 31, 2026Oct 31, 2026

• precision-medicine-portal

  Public
  React project for the frontend of the Precision Medicine Portal by DC Data Science Node

  TypeScript

  •

  Other

  •00 forks in ScilifelabDataCentre/precision-medicine-portal•22 stars in ScilifelabDataCentre/precision-medicine-portal•11 issue in ScilifelabDataCentre/precision-medicine-portal•1010 pull requests in ScilifelabDataCentre/precision-medicine-portal•Updated Oct 31, 2026Oct 31, 2026

• Anubis

  Public
  Proposal submission and review handling system.

  Python

  •

  MIT License

  •33 forks in ScilifelabDataCentre/Anubis•22 stars in ScilifelabDataCentre/Anubis•22 issues in ScilifelabDataCentre/Anubis•2828 pull requests in ScilifelabDataCentre/Anubis•Updated Oct 31, 2026Oct 31, 2026

• dds_cli

  Public
  The command line interface for access to the Data Delivery System primarily developed by the SciLifeLab Data Centre.

  pythoncommand-lineclick

  pythoncommand-lineclick

  Python

  •

  MIT License

  •1414 forks in ScilifelabDataCentre/dds_cli•1313 stars in ScilifelabDataCentre/dds_cli•00 issues in ScilifelabDataCentre/dds_cli•1919 pull requests in ScilifelabDataCentre/dds_cli•Updated Oct 31, 2026Oct 31, 2026

• dds_web

  Public
  A cloud-based system for the delivery of data from SciLifeLab Facilities to their users (e.g. research group).

  pythonflask

  pythonflask

  Python

  •

  Other

  •99 forks in ScilifelabDataCentre/dds_web•99 stars in ScilifelabDataCentre/dds_web•11 issue in ScilifelabDataCentre/dds_web•6464 pull requests in ScilifelabDataCentre/dds_web•Updated Oct 31, 2026Oct 31, 2026

• swedish-pathogens-portal

  Public
  Code repo for swedish-pathogens-portal

  Python

  •

  MIT License

  •00 forks in ScilifelabDataCentre/swedish-pathogens-portal•22 stars in ScilifelabDataCentre/swedish-pathogens-portal•11 issue in ScilifelabDataCentre/swedish-pathogens-portal•55 pull requests in ScilifelabDataCentre/swedish-pathogens-portal•Updated Oct 30, 2026Oct 30, 2026

• openllm-setup

  Public
  Setup files and maintenance scripts for the Open LLM deployments.

  Shell

  •

  MIT License

  •00 forks in ScilifelabDataCentre/openllm-setup•33 stars in ScilifelabDataCentre/openllm-setup•00 issues in ScilifelabDataCentre/openllm-setup•1111 pull requests in ScilifelabDataCentre/openllm-setup•Updated Oct 30, 2026Oct 30, 2026

• RDM-guidelines

  Public
  This is the repository for SciLifelab Research Data Management (RDM) guidelines, a central resource to provide information about data management.

  HTML

  •

  MIT License

  •77 forks in ScilifelabDataCentre/RDM-guidelines•55 stars in ScilifelabDataCentre/RDM-guidelines•1515 issues in ScilifelabDataCentre/RDM-guidelines•55 pull requests in ScilifelabDataCentre/RDM-guidelines•Updated Oct 30, 2026Oct 30, 2026

• development-guidelines

  Public
  Python

  •

  MIT License

  •00 forks in ScilifelabDataCentre/development-guidelines•00 stars in ScilifelabDataCentre/development-guidelines•33 issues in ScilifelabDataCentre/development-guidelines•11 pull request in ScilifelabDataCentre/development-guidelines•Updated Oct 30, 2026Oct 30, 2026

• serve-charts

  Public
  SciLifeLab Serve charts repository

  HTML

  •

  Other

  •11 fork in ScilifelabDataCentre/serve-charts•11 star in ScilifelabDataCentre/serve-charts•00 issues in ScilifelabDataCentre/serve-charts•44 pull requests in ScilifelabDataCentre/serve-charts•Updated Oct 30, 2026Oct 30, 2026

• serve

  Public
  SciLifeLab Serve is a platform offering machine learning model serving, data science app hosting (Shiny, Gradio, Streamlit, Dash, etc.), and other tools to life…

  Python

  •

  Apache License 2.0

  •55 forks in ScilifelabDataCentre/serve•1616 stars in ScilifelabDataCentre/serve•00 issues in ScilifelabDataCentre/serve•33 pull requests in ScilifelabDataCentre/serve•Updated Oct 30, 2026Oct 30, 2026

• data.scilifelab.se

  Public
  SciLifeLab Data Platform

  HTML

  •

  MIT License

  •44 forks in ScilifelabDataCentre/data.scilifelab.se•33 stars in ScilifelabDataCentre/data.scilifelab.se•11 issue in ScilifelabDataCentre/data.scilifelab.se•22 pull requests in ScilifelabDataCentre/data.scilifelab.se•Updated Oct 29, 2026Oct 29, 2026

• data-repositories-list

  Public
  This repository holds the list of datasources/repositories. It is the single source of truth, and should be used by all SciLifeLab Data Centre Services aiming t…

  MIT License

  •00 forks in ScilifelabDataCentre/data-repositories-list•00 stars in ScilifelabDataCentre/data-repositories-list•00 issues in ScilifelabDataCentre/data-repositories-list•11 pull request in ScilifelabDataCentre/data-repositories-list•Updated Oct 29, 2026Oct 29, 2026

• data-centre-template

  Public template
  Template repository for SciLifeLab Data Centre repositories

  MIT License

  •00 forks in ScilifelabDataCentre/data-centre-template•11 star in ScilifelabDataCentre/data-centre-template•22 issues in ScilifelabDataCentre/data-centre-template•00 pull requests in ScilifelabDataCentre/data-centre-template•Updated Oct 29, 2026Oct 29, 2026

• user-support-assistant

  Public
  User support bot for SciLifeLab Serve

  MIT License

  •00 forks in ScilifelabDataCentre/user-support-assistant•00 stars in ScilifelabDataCentre/user-support-assistant•22 issues in ScilifelabDataCentre/user-support-assistant•55 pull requests in ScilifelabDataCentre/user-support-assistant•Updated Oct 28, 2026Oct 28, 2026

• kiarva-backend

  Public
  Public version of kiarva-backend.

  Python

  •

  MIT License

  •00 forks in ScilifelabDataCentre/kiarva-backend•00 stars in ScilifelabDataCentre/kiarva-backend•00 issues in ScilifelabDataCentre/kiarva-backend•77 pull requests in ScilifelabDataCentre/kiarva-backend•Updated Oct 28, 2026Oct 28, 2026

• divbase

  Public
  DivBase - A service to manage, query and version VCF files and associated sample metadata

  Python

  •

  MIT License

  •11 fork in ScilifelabDataCentre/divbase•11 star in ScilifelabDataCentre/divbase•00 issues in ScilifelabDataCentre/divbase•11 pull request in ScilifelabDataCentre/divbase•Updated Oct 27, 2026Oct 27, 2026

• omero-custom-images

  Public
  Custom images for SciLifeLab OMERO

  Python

  •00 forks in ScilifelabDataCentre/omero-custom-images•00 stars in ScilifelabDataCentre/omero-custom-images•00 issues in ScilifelabDataCentre/omero-custom-images•11 pull request in ScilifelabDataCentre/omero-custom-images•Updated Oct 26, 2026Oct 26, 2026

• omero-oauth

  Public
  OMERO.web application to allow OAuth2 login to OMERO

  Python

  •

  GNU Affero General Public License v3.0

  •44 forks in ScilifelabDataCentre/omero-oauth•11 star in ScilifelabDataCentre/omero-oauth•00 issues in ScilifelabDataCentre/omero-oauth•00 pull requests in ScilifelabDataCentre/omero-oauth•Updated Oct 26, 2026Oct 26, 2026

• genome-portal

  Public
  This is the repository for the Swedish Reference Genome Portal, a service facilitating access and discovery of genome data of non-model eukaryotic species studi…

  Python

  •

  MIT License

  •1313 forks in ScilifelabDataCentre/genome-portal•11 star in ScilifelabDataCentre/genome-portal•00 issues in ScilifelabDataCentre/genome-portal•00 pull requests in ScilifelabDataCentre/genome-portal•Updated Oct 26, 2026Oct 26, 2026

• dash-covid-in-sweden

  Public
  Dashboard showing the impact of COVID-19 in Sweden: number of cases, admissions to ICU, and deaths.

  data-visualizationdashplotly-dash+ 1

  data-visualizationdashplotly-dashcovid-19

  Python

  •

  MIT License

  •00 forks in ScilifelabDataCentre/dash-covid-in-sweden•11 star in ScilifelabDataCentre/dash-covid-in-sweden•00 issues in ScilifelabDataCentre/dash-covid-in-sweden•11 pull request in ScilifelabDataCentre/dash-covid-in-sweden•Updated Oct 26, 2026Oct 26, 2026

• omero-landing-page

  Public
  This repository contains the hugo build files for the landing page for the SciLifeLab OMERO prototype service.

  CSS

  •

  MIT License

  •00 forks in ScilifelabDataCentre/omero-landing-page•00 stars in ScilifelabDataCentre/omero-landing-page•00 issues in ScilifelabDataCentre/omero-landing-page•22 pull requests in ScilifelabDataCentre/omero-landing-page•Updated Oct 24, 2026Oct 24, 2026

• streamlit-image-to-smiles

  Public
  Web app that allows users to predict SMILES for chemical structures depicted in images files.

  Python

  •

  MIT License

  •11 fork in ScilifelabDataCentre/streamlit-image-to-smiles•33 stars in ScilifelabDataCentre/streamlit-image-to-smiles•00 issues in ScilifelabDataCentre/streamlit-image-to-smiles•11 pull request in ScilifelabDataCentre/streamlit-image-to-smiles•Updated Oct 23, 2026Oct 23, 2026

• open-webui

  Public
  User-friendly AI Interface (Supports Ollama, OpenAI API, ...)

  Python

  •

  Other

  •23k23k forks in ScilifelabDataCentre/open-webui•00 stars in ScilifelabDataCentre/open-webui•00 issues in ScilifelabDataCentre/open-webui•11 pull request in ScilifelabDataCentre/open-webui•Updated Oct 23, 2026Oct 23, 2026

• shiny-adhd-medication-sweden

  Public
  Dashboard visualising ADHD medication collection among girls and boys (0-19 year olds) in Sweden over time.

  rshinyshiny-apps

  rshinyshiny-apps

  R

  •

  MIT License

  •22 forks in ScilifelabDataCentre/shiny-adhd-medication-sweden•22 stars in ScilifelabDataCentre/shiny-adhd-medication-sweden•00 issues in ScilifelabDataCentre/shiny-adhd-medication-sweden•11 pull request in ScilifelabDataCentre/shiny-adhd-medication-sweden•Updated Oct 23, 2026Oct 23, 2026

• openllm-docs

  Public
  HTML

  •00 forks in ScilifelabDataCentre/openllm-docs•00 stars in ScilifelabDataCentre/openllm-docs•00 issues in ScilifelabDataCentre/openllm-docs•77 pull requests in ScilifelabDataCentre/openllm-docs•Updated Oct 23, 2026Oct 23, 2026