Repositories list

• taxonworks

  Public
  Workbench for biodiversity informatics.

  rubylifenomenclature+ 7

  rubylifenomenclaturetaxonomyevolutioncollectionsspeciesbiodiversity-informaticsbiodiversitydescribe

  Ruby

  •

  MIT License

  •32•105•779•22•Updated Mar 17, 2026Mar 17, 2026

• taxonpages

  Public
  TaxonPages is a tool to serve TaxonPages.

  taxonomyspeciestaxonpages+ 1

  taxonomyspeciestaxonpagesspeciespage

  CSS

  •45•15•32•1•Updated Mar 16, 2026Mar 16, 2026

• distinguish

  Public
  Interactive key engine that feeds off of TaxonWorks API

  TypeScript

  •0•0•0•0•Updated Mar 10, 2026Mar 10, 2026

• taxonworks_doc

  Public
  TaxonWorks (https://taxonworks.org) documentation.

  documentationdocshelp+ 1

  documentationdocshelptaxonworks

  17•14•52•5•Updated Mar 10, 2026Mar 10, 2026

• taxonworks_together

  Public
  Meeting tracking for TWT.

  HTML

  •2•1•5•0•Updated Mar 6, 2026Mar 6, 2026

• otu_mapping_widget

  Public
  Human assisted entity-name matching interface

  Vue

  •0•2•20•6•Updated Mar 5, 2026Mar 5, 2026

• crawlyflower

  Public
  Ruby wrapper for the WoRMS API

  Ruby

  •

  MIT License

  •0•0•0•0•Updated Mar 3, 2026Mar 3, 2026

• speciesfilegroup.github.io

  Public
  Species File Group homepage

  open-sourceopen-scienceinformatics+ 1

  open-sourceopen-scienceinformaticsbiodiversity

  HTML

  •4•0•9•1•Updated Mar 3, 2026Mar 3, 2026

• taxonworks_stats

  Public
  Stand-alone stats ticker app for TaxonWorks.

  Vue

  •0•1•0•0•Updated Mar 3, 2026Mar 3, 2026

• taxonworks_rdoc_docker

  Public
  Docker environment to serve TaxonWorks RDoc pages

  Ruby

  •

  Other

  •0•0•0•0•Updated Feb 18, 2026Feb 18, 2026

• taxonworks_api

  Public
  Documentation for TaxonWorks APIs

  apijsontaxonworks

  apijsontaxonworks

  Vue

  •

  Other

  •7•2•16•0•Updated Feb 13, 2026Feb 13, 2026

• plazucchini

  Public
  Ruby wrapper for the Plazi's TreatmentBank API

  Ruby

  •

  MIT License

  •0•0•0•0•Updated Jan 28, 2026Jan 28, 2026

• hyclas

  Public
  Text classification by highlighting

  semantichighlight-textclassify-texts

  semantichighlight-textclassify-texts

  JavaScript

  •0•0•4•23•Updated Dec 11, 2025Dec 11, 2025

• taxonworks_homepage

  Public
  Homepage for TaxonWorks

  taxonomycollectionsspecies+ 3

  taxonomycollectionsspeciesbiodiversitydigitizationtaxonworks

  JavaScript

  •3•1•3•2•Updated Nov 18, 2025Nov 18, 2025

• bok_choy

  Public
  Ruby wrapper for the BHLnames API

  Ruby

  •

  MIT License

  •0•0•0•0•Updated Oct 30, 2025Oct 30, 2025

• INHS-Insect-Collection-Data-Curation

  Public
  An accesible issue tracker for reporting issues or requests with respect to INHS data quality.

  0•3•30•0•Updated Oct 28, 2025Oct 28, 2025

• checkerberry

  Public
  Ruby wrapper for the GNverifier API

  Ruby

  •

  MIT License

  •0•0•0•0•Updated Oct 22, 2025Oct 22, 2025

• hookkaido

  Public
  API wrapper for OWL based endpoints

  Ruby

  •

  MIT License

  •0•0•0•0•Updated Oct 20, 2025Oct 20, 2025

• nomen

  Public
  A nomenclatural ontology for names (not concepts).

  nomenclaturetaxonomyontology+ 5

  nomenclaturetaxonomyontologyweb-ontology-languagetaxonnomentaxaobofoundry

  The Unlicense

  •1•14•11•0•Updated Oct 13, 2025Oct 13, 2025

• tw-ansible

  Public
  Template playbooks for deploying TaxonWorks into production

  MIT License

  •0•0•4•0•Updated Sep 30, 2025Sep 30, 2025

• taxonifi

  Public
  Tools for moving biodiversity-related data around.

  csvparsenomenclature+ 3

  csvparsenomenclaturenamesimportbiodiversity

  Ruby

  •

  MIT License

  •2•3•0•0•Updated Sep 5, 2025Sep 5, 2025

• bion2n

  Public
  Biology Node2Node (BioN2N) is an open source project to develop biodiversity informatics nodes for the n8n.io workflow automation platform

  TypeScript

  •

  MIT License

  •56k•11•1•0•Updated Jul 24, 2025Jul 24, 2025

• syconium

  Public
  Ruby wrapper for the OpenAlex API

  Ruby

  •

  MIT License

  •0•1•0•0•Updated Jul 11, 2025Jul 11, 2025

• colrapi

  Public
  A low level Catalogue of Life/ChecklistBank Ruby API wrapper

  Ruby

  •

  MIT License

  •1•2•0•0•Updated Apr 1, 2025Apr 1, 2025

• wikimelon

  Public
  A simple, low level Wikidata Ruby API wrapper

  Ruby

  •

  MIT License

  •0•0•0•0•Updated Mar 6, 2025Mar 6, 2025

• 2025_workshop_on_taxon_names

  Public
  Organizing verbiage and perhaps more for the workshop/hackathon

  MIT License

  •0•2•6•0•Updated Mar 6, 2025Mar 6, 2025

• pinpoint

  Public
  Pinpoint is a engine for displaying hierarchical keys that identify the Earth's speices.

  TypeScript

  •0•0•0•0•Updated Jan 10, 2025Jan 10, 2025

• sled

  Public
  UI for image segmentation of slide collections

  Vue

  •0•0•2•3•Updated Dec 16, 2024Dec 16, 2024

• bananompy

  Public
  Python wrapper on the Bionomia API

  Python

  •

  MIT License

  •0•4•0•0•Updated Nov 6, 2024Nov 6, 2024

• Rtaxonworks

  Public
  R client for TaxonWorks

  R

  •

  MIT License

  •1•1•1•0•Updated Nov 6, 2024Nov 6, 2024